RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 PNKPQ96T60 521 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 FUT8Q9BYC5 575 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 LRRC19Q9H756 370 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.69□□□□□ -0.54
COL4A5-201ENST00000328300 RIPK2O43353 540 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 ITGAVP06756 1048 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 BDNFP23560 247 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 GRK4P32298 578 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 MSLNQ13421 630 aaPredicted RBP11.69□□□□□ -0.54
COL4A5-201ENST00000328300 CAMK2GQ13555 558 aaPredicted RBP11.69□□□□□ -0.54
COL4A5-201ENST00000328300 SLC24A5Q71RS6 500 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 CHORDC1Q9UHD1 332 aaPredicted RBP11.69□□□□□ -0.54
COL4A5-201ENST00000328300 BLOC1S6Q9UL45 172 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 CLCA2Q9UQC9 943 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 SYN3O14994 580 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 PDHA1P08559 390 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 PYGMP11217 842 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 CCDC130P13994 396 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 KCNMA1Q12791 1236 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 ARSHQ5FYA8 562 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 C9orf57Q5W0N0 161 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 GPAMQ9HCL2 828 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 AHSPQ9NZD4 102 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 APPL1Q9UKG1 709 aa11.69□□□□□ -0.54
COL4A5-201ENST00000328300 RUVBL2Q9Y230 463 aaKnown RBP11.69□□□□□ -0.54
COL4A5-201ENST00000328300 ENO1P06733 434 aaKnown RBP11.68□□□□□ -0.54
COL4A5-201ENST00000328300 RARAP10276 462 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 ACADMP11310 421 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 MATKP42679 507 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 IRAK1P51617 712 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 FMO1Q01740 532 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 BCL2L1Q07817 233 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 INTS6LQ5JSJ4 861 aaKnown RBP11.68□□□□□ -0.54
COL4A5-201ENST00000328300 ARMC12Q5T9G4 340 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 OR2W6PQ8NHA6 318 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 RIN3Q8TB24 985 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 CSGALNACT1Q8TDX6 532 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 EDEM1Q92611 657 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 ZYG11BQ9C0D3 744 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.68□□□□□ -0.54
COL4A5-201ENST00000328300 TIMM13Q9Y5L4 95 aaPredicted RBP11.68□□□□□ -0.54
COL4A5-201ENST00000328300 RPTORQ8N122 1335 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 CSDE1O75534 798 aaKnown RBP11.68□□□□□ -0.54
COL4A5-201ENST00000328300 RAP1GDS1P52306 607 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 COPAP53621 1224 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 DLG4P78352 724 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 MRPS5P82675 430 aaKnown RBP11.68□□□□□ -0.54
COL4A5-201ENST00000328300 HPCAP84074 193 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 PCID2Q5JVF3 399 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 SH2D3CQ8N5H7 860 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 ZNF555Q8NEP9 628 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 POLR2EP19388 210 aaKnown RBP11.68□□□□□ -0.54
COL4A5-201ENST00000328300 TYMPP19971 482 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 MSH3P20585 1137 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 PRKAA1Q13131 559 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 GRAMD4Q6IC98 578 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 LCLAT1Q6UWP7 414 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 USP45Q70EL2 814 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 SCUBE3Q8IX30 993 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 MYLPFQ96A32 169 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 APOPT1Q96IL0 206 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 TAS2R13Q9NYV9 303 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 MORF4L1Q9UBU8 362 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 PCDHGC3Q9UN70 934 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 A0A1W2PQ67 120 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 ALADP13716 330 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 CPA3P15088 417 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 ATP4AP20648 1035 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 DAB2IPQ5VWQ8 1189 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 FAM183BPQ6ZVS7 135 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 NECAB2Q7Z6G3 386 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 MON1AQ86VX9 555 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 KCNMB4Q86W47 210 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 LPCAT1Q8NF37 534 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 DNAJC18Q9H819 358 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 COG4Q9H9E3 785 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 IFRD1O00458 451 aaPredicted RBP11.68□□□□□ -0.54
COL4A5-201ENST00000328300 RAD51BO15315 384 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 ARF4P18085 180 aaPredicted RBP11.68□□□□□ -0.54
COL4A5-201ENST00000328300 SCNN1BP51168 640 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 CDH8P55286 799 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 CNTN1Q12860 1018 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 DPYSL3Q14195 570 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 PSMD5Q16401 504 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 OLFML2BQ68BL8 750 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 CES5AQ6NT32 575 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 KYAT3Q6YP21 454 aaKnown RBP11.68□□□□□ -0.54
COL4A5-201ENST00000328300 TAGAPQ8N103 731 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 MAGEC3Q8TD91 643 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 FAM111AQ96PZ2 611 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 SLC39A8Q9C0K1 460 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 POLG2Q9UHN1 485 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 ZMYM5Q9UJ78 669 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 DLG5Q8TDM6 1919 aa11.68□□□□□ -0.54
COL4A5-201ENST00000328300 EOMESO95936 686 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 PGK1P00558 417 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 KRT6AP02538 564 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 KRT6BP04259 564 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 KRT6CP48668 564 aa11.67□□□□□ -0.54
COL4A5-201ENST00000328300 HK2P52789 917 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms