RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 CYP4V2Q6ZWL3 525 aaPredicted RBP12.53□□□□□ -0.4
SEC24A-201ENST00000322887 ZNF534Q76KX8 674 aa12.53□□□□□ -0.4
SEC24A-201ENST00000322887 XYLT1Q86Y38 959 aa12.53□□□□□ -0.4
SEC24A-201ENST00000322887 UBR7Q8N806 425 aa12.53□□□□□ -0.4
SEC24A-201ENST00000322887 TRIB2Q92519 343 aa12.53□□□□□ -0.4
SEC24A-201ENST00000322887 EMID1Q96A84 441 aaPredicted RBP12.53□□□□□ -0.4
SEC24A-201ENST00000322887 HIC2Q96JB3 615 aa12.53□□□□□ -0.4
SEC24A-201ENST00000322887 DDX56Q9NY93 547 aaKnown RBP12.53□□□□□ -0.4
SEC24A-201ENST00000322887 Q9Y3F1 56 aa12.53□□□□□ -0.4
SEC24A-201ENST00000322887 CCDC78A2IDD5 438 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 WDR27A2RRH5 827 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 AIM2O14862 343 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 CFLARO15519 480 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 CREB3O43889 395 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 ADCY3O60266 1144 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 FOXD2O60548 495 aaPredicted RBP12.52□□□□□ -0.41
SEC24A-201ENST00000322887 KRT37O76014 449 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 TRUB2O95900 331 aaKnown RBP12.52□□□□□ -0.41
SEC24A-201ENST00000322887 SERPINA6P08185 405 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 ZNF865P0CJ78 1059 aaPredicted RBP12.52□□□□□ -0.41
SEC24A-201ENST00000322887 ASPAP45381 313 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 SLC1A6P48664 564 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 IDH3AP50213 366 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 GALK1P51570 392 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 JAK3P52333 1124 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 CCL14Q16627 93 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 MAP3K21Q5TCX8 1036 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 TMCO4Q5TGY1 634 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 LRRC38Q5VT99 294 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 CPNE9Q8IYJ1 553 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.52□□□□□ -0.41
SEC24A-201ENST00000322887 SNX31Q8N9S9 440 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 RDM1Q8NG50 284 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 RAET1EQ8TD07 263 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 DEPDC1BQ8WUY9 529 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 TMEM165Q9HC07 324 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 B4GALT5O43286 388 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 DGAT1O75907 488 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 ALDOAP04075 364 aaKnown RBP12.52□□□□□ -0.41
SEC24A-201ENST00000322887 TFAP2AP05549 437 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 HSPA1AP0DMV8 641 aaKnown RBP12.52□□□□□ -0.41
SEC24A-201ENST00000322887 HSPA1BP0DMV9 641 aaKnown RBP12.52□□□□□ -0.41
SEC24A-201ENST00000322887 SNRPFP62306 86 aaKnown RBP12.52□□□□□ -0.41
SEC24A-201ENST00000322887 KRT76Q01546 638 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 GBE1Q04446 702 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 TBL3Q12788 808 aaKnown RBP12.52□□□□□ -0.41
SEC24A-201ENST00000322887 ITGA9Q13797 1035 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 MBLAC2Q68D91 279 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 KLHDC10Q6PID8 442 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 EEPD1Q7L9B9 569 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 LRRC71Q8N4P6 559 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 NCSTNQ92542 709 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 HAPLN3Q96S86 360 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 WDR55Q9H6Y2 383 aaPredicted RBP12.52□□□□□ -0.41
SEC24A-201ENST00000322887 TBC1D30Q9Y2I9 924 aa12.52□□□□□ -0.41
SEC24A-201ENST00000322887 DOCK3Q8IZD9 2030 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 LOXHD1Q8IVV2 1947 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 ASLP04424 464 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 PRKCGP05129 697 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 CYBAP13498 195 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 COPAP53621 1224 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 SESN2P58004 480 aaPredicted RBP12.51□□□□□ -0.41
SEC24A-201ENST00000322887 CDKL1Q00532 357 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 DLG2Q15700 870 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 MYLK3Q32MK0 819 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 DNAL1Q4LDG9 190 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 SLC9B1Q4ZJI4 515 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 ATG16L1Q676U5 607 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 PDPK2PQ6A1A2 396 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 ZBTB46Q86UZ6 589 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 FBXO16Q8IX29 292 aaPredicted RBP12.51□□□□□ -0.41
SEC24A-201ENST00000322887 C12orf29Q8N999 325 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 ZNF512Q96ME7 567 aaPredicted RBP12.51□□□□□ -0.41
SEC24A-201ENST00000322887 SORT1Q99523 831 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 PRPF18Q99633 342 aaKnown RBP12.51□□□□□ -0.41
SEC24A-201ENST00000322887 JPH1Q9HDC5 661 aaPredicted RBP12.51□□□□□ -0.41
SEC24A-201ENST00000322887 NGRNQ9NPE2 291 aaKnown RBP12.51□□□□□ -0.41
SEC24A-201ENST00000322887 DNAAF2Q9NVR5 837 aaKnown RBP12.51□□□□□ -0.41
SEC24A-201ENST00000322887 CNTN6Q9UQ52 1028 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 TDRKHQ9Y2W6 561 aaKnown RBP12.51□□□□□ -0.41
SEC24A-201ENST00000322887 TRIM17Q9Y577 477 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 TRIP11Q15643 1979 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 SF3B1O75533 1304 aaKnown RBP eCLIP12.51□□□□□ -0.414e-9■■■■■ 60.3
SEC24A-201ENST00000322887 ATG7O95352 703 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 APOEP02649 317 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 ITGA2BP08514 1039 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 FGFR3P22607 806 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 IL4RP24394 825 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 DYNC1I2Q13409 638 aaKnown RBP12.51□□□□□ -0.41
SEC24A-201ENST00000322887 CAPSQ13938 189 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 PDE1CQ14123 709 aaPredicted RBP12.51□□□□□ -0.41
SEC24A-201ENST00000322887 ZNF699Q32M78 642 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 DUSP28Q4G0W2 176 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 TMEM198Q66K66 360 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 METTL7BQ6UX53 244 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 NAPRTQ6XQN6 538 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 TRIM50Q86XT4 487 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 PLD6Q8N2A8 252 aaKnown RBP12.51□□□□□ -0.41
SEC24A-201ENST00000322887 PLD5Q8N7P1 536 aa12.51□□□□□ -0.41
SEC24A-201ENST00000322887 CEP70Q8NHQ1 597 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms