RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 OR52K1Q8NGK4 314 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 SLC7A14Q8TBB6 771 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 ZFP42Q96MM3 310 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 OSBPL1AQ9BXW6 950 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 NMRK1Q9NWW6 199 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 KLHL8Q9P2G9 620 aaPredicted RBP17.9■□□□□ 0.46
COL9A1-201ENST00000320755 DERAQ9Y315 318 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 MRPL42Q9Y6G3 142 aaKnown RBP17.9■□□□□ 0.46
COL9A1-201ENST00000320755 WASF2Q9Y6W5 498 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 BTBD19C9JJ37 291 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 NVLO15381 856 aaKnown RBP17.9■□□□□ 0.46
COL9A1-201ENST00000320755 PSMG1O95456 288 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 GSTA2P09210 222 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 DEUP1Q05D60 604 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 HIC1Q14526 733 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 WSCD1Q658N2 575 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 HACE1Q8IYU2 909 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 TNS4Q8IZW8 715 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 AGR3Q8TD06 166 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 NRG4Q8WWG1 115 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 ARNTL2Q8WYA1 636 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 OLFM3Q96PB7 478 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 THAP1Q9NVV9 213 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 USP3Q9Y6I4 520 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 NUP205Q92621 2012 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 CCL15-CCL14A0A0B4J2E2 113 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 SPECC1L-ADORA2AF8WAN1 911 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 ITGA2BP08514 1039 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 FDFT1P37268 417 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 ACADSBP45954 432 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 CCL15Q16663 113 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 TSNAXIP1Q2TAA8 658 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 ALKAL1Q6UXT8 129 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 GPR142Q7Z601 462 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 C10orf107Q8IVU9 208 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.9■□□□□ 0.46
COL9A1-201ENST00000320755 DNAAF3Q8N9W5 541 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 ARRDC4Q8NCT1 418 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 CFAP61Q8NHU2 1237 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 MAML3Q96JK9 1138 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 ACSS2Q9NR19 701 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 BATF3Q9NR55 127 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 PIGVQ9NUD9 493 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 EMCNQ9ULC0 261 aa17.9■□□□□ 0.46
COL9A1-201ENST00000320755 EEF2KO00418 725 aaKnown RBP17.89■□□□□ 0.45
COL9A1-201ENST00000320755 NEBLO76041 1014 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 CD4P01730 458 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 LMNAP02545 664 aaKnown RBP17.89■□□□□ 0.45
COL9A1-201ENST00000320755 SLC1A6P48664 564 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 LILRA4P59901 499 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 VWA5B1Q5TIE3 1220 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 C9orf131Q5VYM1 1079 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 STRADAQ7RTN6 431 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 ATP2A3Q93084 1043 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 EMID1Q96A84 441 aaPredicted RBP17.89■□□□□ 0.45
COL9A1-201ENST00000320755 TNIP3Q96KP6 325 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 HSFY1Q96LI6 401 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 TINF2Q9BSI4 451 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 PNPOQ9NVS9 261 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 UBP1Q9NZI7 540 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 CAPN14A8MX76 684 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 GOLGA8TH3BQL2 631 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 TREHO43280 583 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 EPHX2P34913 555 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 SMYD5Q6GMV2 418 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 LRRC8BQ6P9F7 803 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 RNF169Q8NCN4 708 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 SHKBP1Q8TBC3 707 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 ZNF560Q96MR9 790 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 FAM124BQ9H5Z6 455 aaPredicted RBP17.89■□□□□ 0.45
COL9A1-201ENST00000320755 MORF4L1Q9UBU8 362 aa17.89■□□□□ 0.45
COL9A1-201ENST00000320755 ATP9BO43861 1147 aa17.88■□□□□ 0.45
COL9A1-201ENST00000320755 SNNO75324 88 aaPredicted RBP17.88■□□□□ 0.45
COL9A1-201ENST00000320755 C6orf222P0C671 652 aaPredicted RBP17.88■□□□□ 0.45
COL9A1-201ENST00000320755 TKTL1P51854 596 aa17.88■□□□□ 0.45
COL9A1-201ENST00000320755 WASHC5Q12768 1159 aa17.88■□□□□ 0.45
COL9A1-201ENST00000320755 TWF2Q6IBS0 349 aaKnown RBP17.88■□□□□ 0.45
COL9A1-201ENST00000320755 TMPRSS6Q8IU80 811 aa17.88■□□□□ 0.45
COL9A1-201ENST00000320755 WDR75Q8IWA0 830 aaKnown RBP17.88■□□□□ 0.45
COL9A1-201ENST00000320755 SCG3Q8WXD2 468 aaKnown RBP17.88■□□□□ 0.45
COL9A1-201ENST00000320755 TMEM216Q9P0N5 145 aa17.88■□□□□ 0.45
COL9A1-201ENST00000320755 CLEC11AQ9Y240 323 aa17.88■□□□□ 0.45
COL9A1-201ENST00000320755 SNX10Q9Y5X0 201 aa17.88■□□□□ 0.45
COL9A1-201ENST00000320755 RBM47A0AV96 593 aaKnown RBP17.88■□□□□ 0.45
COL9A1-201ENST00000320755 NRP1O14786 923 aa17.88■□□□□ 0.45
COL9A1-201ENST00000320755 GSRP00390 522 aa17.88■□□□□ 0.45
COL9A1-201ENST00000320755 SAT1P21673 171 aa17.88■□□□□ 0.45
COL9A1-201ENST00000320755 PDK1Q15118 436 aa17.88■□□□□ 0.45
COL9A1-201ENST00000320755 ANO7Q6IWH7 933 aa17.88■□□□□ 0.45
COL9A1-201ENST00000320755 NPLOC4Q8TAT6 608 aa17.88■□□□□ 0.45
COL9A1-201ENST00000320755 ZNF669Q96BR6 464 aaPredicted RBP17.88■□□□□ 0.45
COL9A1-201ENST00000320755 ZNF778Q96MU6 729 aa17.88■□□□□ 0.45
COL9A1-201ENST00000320755 KCNK16Q96T55 309 aa17.88■□□□□ 0.45
COL9A1-201ENST00000320755 FERMT1Q9BQL6 677 aa17.88■□□□□ 0.45
COL9A1-201ENST00000320755 TAGLN3Q9UI15 199 aa17.88■□□□□ 0.45
COL9A1-201ENST00000320755 ZNF638Q14966 1978 aaKnown RBP17.88■□□□□ 0.45
COL9A1-201ENST00000320755 ARHGAP42A6NI28 874 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 RRN3P2A6NIE6 340 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 E7ENQ6 273 aa17.87■□□□□ 0.45
COL9A1-201ENST00000320755 PLIN3O60664 434 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms