RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 NFKB1P19838 968 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 GSSP48637 474 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 CDC42EP1Q00587 391 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 NRF1Q16656 503 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 ADCK2Q7Z695 626 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 SLC44A2Q8IWA5 706 aaPredicted RBP16.87■□□□□ 0.29
CLIP4-201ENST00000320081 OTULINQ96BN8 352 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 BRD8Q9H0E9 1235 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 BATF3Q9NR55 127 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 MPP6Q9NZW5 540 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 SNX5Q9Y5X3 404 aa16.87■□□□□ 0.29
CLIP4-201ENST00000320081 MOXD2PA6NHM9 499 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 BRCC3P46736 316 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 PWP1Q13610 501 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 MARC1Q5VT66 337 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 PMF1Q6P1K2 205 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 C16orf89Q6UX73 402 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 PCYOX1LQ8NBM8 494 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 NRBF2Q96F24 287 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 ADAM2Q99965 735 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 EFCAB1Q9HAE3 211 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 SLC17A6Q9P2U8 582 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 DSEQ9UL01 958 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 USP1O94782 785 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 FECHP22830 423 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 MFSD10Q14728 455 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 MAPRE2Q15555 327 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 AGAP9Q5VTM2 703 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 BNC2Q6ZN30 1099 aaPredicted RBP16.86■□□□□ 0.29
CLIP4-201ENST00000320081 ECHDC2Q86YB7 292 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 RIOX2Q8IUF8 465 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 TSPAN17Q96FV3 270 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 PIDD1Q9HB75 910 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 ZFYVE28Q9HCC9 887 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 RNF112Q9ULX5 631 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 SOX13Q9UN79 622 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 NT5C1B-RDH14C9J2C7 533 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 MTSS1O43312 755 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 MGEA5O60502 916 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 HNRNPLP14866 589 aaKnown RBP eCLIP16.86■□□□□ 0.29
CLIP4-201ENST00000320081 PTPN1P18031 435 aaKnown RBP16.86■□□□□ 0.29
CLIP4-201ENST00000320081 CDH13P55290 713 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 CDK16Q00536 496 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 CDH18Q13634 790 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 SLC39A12Q504Y0 691 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 VWA5B1Q5TIE3 1220 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 MFN1Q8IWA4 741 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 DCP1BQ8IZD4 617 aaKnown RBP16.86■□□□□ 0.29
CLIP4-201ENST00000320081 STK32AQ8WU08 396 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 CINPQ9BW66 212 aaPredicted RBP16.86■□□□□ 0.29
CLIP4-201ENST00000320081 NMUR2Q9GZQ4 415 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 XPNPEP3Q9NQH7 507 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 NCKIPSDQ9NZQ3 722 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 SFMBT1Q9UHJ3 866 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 TNFSF13BQ9Y275 285 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 SNX10Q9Y5X0 201 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 NRXN3Q9Y4C0 1643 aa16.86■□□□□ 0.29
CLIP4-201ENST00000320081 OR1E1P30953 314 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 CACNA2D1P54289 1103 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 OAZ1P54368 228 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 FAM171A1Q5VUB5 890 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 DDX53Q86TM3 631 aaKnown RBP16.85■□□□□ 0.29
CLIP4-201ENST00000320081 CPT1BQ92523 772 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 DACH2Q96NX9 599 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 NAT9Q9BTE0 207 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 RERGLQ9H628 205 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 WDR55Q9H6Y2 383 aaPredicted RBP16.85■□□□□ 0.29
CLIP4-201ENST00000320081 CACYBPQ9HB71 228 aaKnown RBP16.85■□□□□ 0.29
CLIP4-201ENST00000320081 NMRAL1Q9HBL8 299 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 THAP1Q9NVV9 213 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 KIF17Q9P2E2 1029 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 SERPINE1P05121 402 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 ZNF23P17027 643 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 ARHGDIAP52565 204 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 SP2Q02086 613 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 PDK4Q16654 411 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 SLC45A4Q5BKX6 768 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 ZDHHC24Q6UX98 284 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 RIPOR1Q6ZS17 1223 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 TTC7BQ86TV6 843 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 TMEM130Q8N3G9 435 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 CALML6Q8TD86 181 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 CDHR5Q9HBB8 845 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 NMRK2Q9NPI5 230 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 DDX18Q9NVP1 670 aaKnown RBP16.85■□□□□ 0.29
CLIP4-201ENST00000320081 IRAK4Q9NWZ3 460 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 CITO14578 2027 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 FAM208AQ9UK61 1670 aaKnown RBP16.85■□□□□ 0.29
CLIP4-201ENST00000320081 F9P00740 461 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 OR4Q2P0C623 313 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 CERCAMQ5T4B2 595 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 TMC7Q7Z402 723 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 TMPRSS6Q8IU80 811 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 SNX31Q8N9S9 440 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 UBXN6Q9BZV1 441 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 ACSS3Q9H6R3 686 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 PRKAG2Q9UGJ0 569 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 CRLS1Q9UJA2 301 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 SLIT3O75094 1523 aa16.85■□□□□ 0.29
CLIP4-201ENST00000320081 NNMTP40261 264 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms