RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 SYT15Q9BQS2 421 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 CD248Q9HCU0 757 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 SLCO1B3Q9NPD5 702 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 BAIAP2L1Q9UHR4 511 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 SLC4A7Q9Y6M7 1214 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 LPXNO60711 386 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 GABBR2O75899 941 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 DGKIO75912 1065 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 CCNB1P14635 433 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 ADORA2BP29275 332 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 L1CAMP32004 1257 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 YWHAZP63104 245 aaKnown RBP14.62□□□□□ -0.07
VRK3-201ENST00000316763 MTM1Q13496 603 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 CA9Q16790 459 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 KBTBD12Q3ZCT8 623 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 TTC39BQ5VTQ0 682 aaPredicted RBP14.62□□□□□ -0.07
VRK3-201ENST00000316763 SLC26A11Q86WA9 606 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 METTL23Q86XA0 190 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 VPS52Q8N1B4 723 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 SPOCK2Q92563 424 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 CENPIQ92674 756 aaPredicted RBP14.62□□□□□ -0.07
VRK3-201ENST00000316763 HSFY1Q96LI6 401 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 RAB3IPQ96QF0 476 aaPredicted RBP14.62□□□□□ -0.07
VRK3-201ENST00000316763 ACBD6Q9BR61 282 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 MRPL9Q9BYD2 267 aaKnown RBP14.62□□□□□ -0.07
VRK3-201ENST00000316763 B3GNT5Q9BYG0 378 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 UBE2OQ9C0C9 1292 aaKnown RBP14.62□□□□□ -0.07
VRK3-201ENST00000316763 DHX35Q9H5Z1 703 aaKnown RBP14.62□□□□□ -0.07
VRK3-201ENST00000316763 PRDM16Q9HAZ2 1276 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 NOD2Q9HC29 1040 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 ARHGEF3Q9NR81 526 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 ZC3H7BQ9UGR2 993 aaKnown RBP14.62□□□□□ -0.07
VRK3-201ENST00000316763 PCDHB8Q9UN66 801 aa14.62□□□□□ -0.07
VRK3-201ENST00000316763 UNC5CO95185 931 aa14.61□□□□□ -0.07
VRK3-201ENST00000316763 ADRA1DP25100 572 aa14.61□□□□□ -0.07
VRK3-201ENST00000316763 OR1G1P47890 313 aa14.61□□□□□ -0.07
VRK3-201ENST00000316763 MLLT1Q03111 559 aaPredicted RBP14.61□□□□□ -0.07
VRK3-201ENST00000316763 SLC18A2Q05940 514 aa14.61□□□□□ -0.07
VRK3-201ENST00000316763 SLC45A4Q5BKX6 768 aa14.61□□□□□ -0.07
VRK3-201ENST00000316763 EFHC1Q5JVL4 640 aa14.61□□□□□ -0.07
VRK3-201ENST00000316763 BZW1Q7L1Q6 419 aaKnown RBP14.61□□□□□ -0.07
VRK3-201ENST00000316763 ASRGL1Q7L266 308 aa14.61□□□□□ -0.07
VRK3-201ENST00000316763 OTOAQ7RTW8 1153 aa14.61□□□□□ -0.07
VRK3-201ENST00000316763 APOPT1Q96IL0 206 aa14.61□□□□□ -0.07
VRK3-201ENST00000316763 DUSP16Q9BY84 665 aa14.61□□□□□ -0.07
VRK3-201ENST00000316763 MYLK2Q9H1R3 596 aa14.61□□□□□ -0.07
VRK3-201ENST00000316763 MTIF3Q9H2K0 278 aaKnown RBP14.61□□□□□ -0.07
VRK3-201ENST00000316763 ETNK1Q9HBU6 452 aa14.61□□□□□ -0.07
VRK3-201ENST00000316763 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.61□□□□□ -0.07
VRK3-201ENST00000316763 AP4E1Q9UPM8 1137 aa14.61□□□□□ -0.07
VRK3-201ENST00000316763 MYBPHLA2RUH7 354 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 GOLGA8RI6L899 631 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 GCATO75600 419 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 KRT37O76014 449 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 APRTP07741 180 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 LCP1P13796 627 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 EZRP15311 586 aaKnown RBP14.6□□□□□ -0.07
VRK3-201ENST00000316763 SLC8A3P57103 927 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 KCNJ2P63252 427 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 SARNPP82979 210 aaKnown RBP14.6□□□□□ -0.07
VRK3-201ENST00000316763 MDH1BQ5I0G3 518 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 SYCP2LQ5T4T6 812 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 FAM171BQ6P995 826 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 C10orf82Q8WW14 230 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 PKMYT1Q99640 499 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 C11orf84Q9BUA3 381 aaPredicted RBP14.6□□□□□ -0.07
VRK3-201ENST00000316763 MANSC1Q9H8J5 431 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 ZNF180Q9UJW8 692 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 COL4A6Q14031 1691 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 TBKBP1A7MCY6 615 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 NRP1O14786 923 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 HGSO14964 777 aaPredicted RBP14.6□□□□□ -0.07
VRK3-201ENST00000316763 XPO1O14980 1071 aaKnown RBP14.6□□□□□ -0.07
VRK3-201ENST00000316763 AVILO75366 819 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 PIAS1O75925 651 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 SNRPAP09012 282 aaKnown RBP14.6□□□□□ -0.07
VRK3-201ENST00000316763 NEFHP12036 1026 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 NPR3P17342 541 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 TPSB2P20231 275 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 ARL4AP40617 200 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 RASSF2P50749 326 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 TPSAB1Q15661 275 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 SPDYAQ5MJ70 313 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 OVOS1Q6IE37 1185 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 STRADAQ7RTN6 431 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 LRRC6Q86X45 466 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 CHSY1Q86X52 802 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 CTAGE3PQ8IX95 158 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 CCDC110Q8TBZ0 833 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 PHOSPHO2Q8TCD6 241 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 ZNF689Q96CS4 500 aaPredicted RBP14.6□□□□□ -0.07
VRK3-201ENST00000316763 ERP27Q96DN0 273 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 THOC1Q96FV9 657 aaKnown RBP14.6□□□□□ -0.07
VRK3-201ENST00000316763 PCED1BQ96HM7 432 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 SLC9A7Q96T83 725 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 KLF6Q99612 283 aaPredicted RBP14.6□□□□□ -0.07
VRK3-201ENST00000316763 TMEM175Q9BSA9 504 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 IQCGQ9H095 443 aaKnown RBP14.6□□□□□ -0.07
VRK3-201ENST00000316763 SLC17A7Q9P2U7 560 aa14.6□□□□□ -0.07
VRK3-201ENST00000316763 PRG3Q9Y2Y8 225 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms