RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 TUBB8Q3ZCM7 444 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 BRMS1LQ5PSV4 323 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 NPWQ8N729 165 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 PRCCQ92733 491 aaPredicted RBP16.23■□□□□ 0.19
CALR-201ENST00000316448 UBE2OQ9C0C9 1292 aaKnown RBP16.23■□□□□ 0.19
CALR-201ENST00000316448 SLC12A6Q9UHW9 1150 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 TCRBV7S3A2A0A539 114 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 KCNN4O15554 427 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 MOCS2O96007 188 aaPredicted RBP16.23■□□□□ 0.19
CALR-201ENST00000316448 MYOGP15173 224 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 VAV1P15498 845 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 ATP2A2P16615 1042 aaKnown RBP16.23■□□□□ 0.19
CALR-201ENST00000316448 DNAJB1P25685 340 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 CCR1P32246 355 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 ACTN2P35609 894 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 TPI1P60174 286 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 ERVFC1P60507 584 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 PPP2R5DQ14738 602 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 TNFAIP8L3Q5GJ75 292 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 MANEALQ5VSG8 457 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 ANKRD22Q5VYY1 191 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 PCGF5Q86SE9 256 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 ARFGAP2Q8N6H7 521 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 RTP4Q96DX8 246 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 SERPINB11Q96P15 392 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 HAPLN3Q96S86 360 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 LGMNQ99538 433 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 ROPN1BQ9BZX4 212 aaPredicted RBP16.23■□□□□ 0.19
CALR-201ENST00000316448 ROPN1Q9HAT0 212 aaPredicted RBP16.23■□□□□ 0.19
CALR-201ENST00000316448 ALG13Q9NP73 1137 aaKnown RBP16.23■□□□□ 0.19
CALR-201ENST00000316448 FNIP2Q9P278 1114 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 NOVA2Q9UNW9 492 aaKnown RBP16.23■□□□□ 0.19
CALR-201ENST00000316448 TLR6Q9Y2C9 796 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 HS3ST4Q9Y661 456 aa16.23■□□□□ 0.19
CALR-201ENST00000316448 TLL1O43897 1013 aa16.22■□□□□ 0.19
CALR-201ENST00000316448 TCEA3O75764 348 aa16.22■□□□□ 0.19
CALR-201ENST00000316448 ABHD2P08910 425 aa16.22■□□□□ 0.19
CALR-201ENST00000316448 SRGAP2BP0DMP2 458 aa16.22■□□□□ 0.19
CALR-201ENST00000316448 STIP1P31948 543 aaKnown RBP16.22■□□□□ 0.19
CALR-201ENST00000316448 NR2C2P49116 596 aa16.22■□□□□ 0.19
CALR-201ENST00000316448 ATP1A2P50993 1020 aa16.22■□□□□ 0.19
CALR-201ENST00000316448 TBX4P57082 545 aa16.22■□□□□ 0.19
CALR-201ENST00000316448 MAGOHP61326 146 aaKnown RBP16.22■□□□□ 0.19
CALR-201ENST00000316448 KYNUQ16719 465 aa16.22■□□□□ 0.19
CALR-201ENST00000316448 SLC45A4Q5BKX6 768 aa16.22■□□□□ 0.19
CALR-201ENST00000316448 C10orf120Q5SQS8 335 aa16.22■□□□□ 0.19
CALR-201ENST00000316448 C6orf118Q5T5N4 469 aa16.22■□□□□ 0.19
CALR-201ENST00000316448 PIK3R6Q5UE93 754 aa16.22■□□□□ 0.19
CALR-201ENST00000316448 MIB1Q86YT6 1006 aa16.22■□□□□ 0.19
CALR-201ENST00000316448 EPS8L3Q8TE67 593 aaKnown RBP16.22■□□□□ 0.19
CALR-201ENST00000316448 CPT1BQ92523 772 aa16.22■□□□□ 0.19
CALR-201ENST00000316448 KLC2Q9H0B6 622 aa16.22■□□□□ 0.19
CALR-201ENST00000316448 HSFX1Q9UBD0 423 aa16.22■□□□□ 0.19
CALR-201ENST00000316448 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.21■□□□□ 0.19
CALR-201ENST00000316448 GRXCR1A8MXD5 290 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 CSPG5O95196 566 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 CXCL14O95715 111 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 HMBSP08397 361 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 HPDP32754 393 aaPredicted RBP16.21■□□□□ 0.19
CALR-201ENST00000316448 IRAK1P51617 712 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 TWF1Q12792 350 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 XRCC4Q13426 336 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 FAM109BQ6ICB4 259 aaPredicted RBP16.21■□□□□ 0.19
CALR-201ENST00000316448 PPIL6Q8IXY8 311 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 TCEAL8Q8IYN2 117 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 NAT8LQ8N9F0 302 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 UHMK1Q8TAS1 419 aaKnown RBP16.21■□□□□ 0.19
CALR-201ENST00000316448 QKIQ96PU8 341 aaKnown RBP eCLIP16.21■□□□□ 0.19
CALR-201ENST00000316448 PLXNA4Q9HCM2 1894 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 MARCH2Q9P0N8 246 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 BCCIPQ9P287 314 aaKnown RBP eCLIP16.21■□□□□ 0.19
CALR-201ENST00000316448 SLC12A8A0AV02 714 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 ZNF840PA6NDX5 716 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 SMAPO00193 183 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 RASGRF2O14827 1237 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 EIF3HO15372 352 aaKnown RBP eCLIP16.21■□□□□ 0.19
CALR-201ENST00000316448 TGM5O43548 720 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 TLR5O60602 858 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 AGTP01019 485 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 EPHB2P29323 1055 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 BMPR1AP36894 532 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 MAGEA4P43358 317 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 PSEN1P49768 467 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 MLLT6P55198 1093 aaPredicted RBP16.21■□□□□ 0.19
CALR-201ENST00000316448 PPP2R2AP63151 447 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 GNGT1P63211 74 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 TRIP4Q15650 581 aaPredicted RBP16.21■□□□□ 0.19
CALR-201ENST00000316448 C9orf50Q5SZB4 431 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 ZNF683Q8IZ20 524 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 CCDC110Q8TBZ0 833 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 PHOSPHO2Q8TCD6 241 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 PRDM12Q9H4Q4 367 aa16.21■□□□□ 0.19
CALR-201ENST00000316448 CFAP69A5D8W1 941 aa16.2■□□□□ 0.18
CALR-201ENST00000316448 IGLV3-27P01718 113 aa16.2■□□□□ 0.18
CALR-201ENST00000316448 CA8P35219 290 aa16.2■□□□□ 0.18
CALR-201ENST00000316448 ALDH1A3P47895 512 aa16.2■□□□□ 0.18
CALR-201ENST00000316448 PLD1Q13393 1074 aa16.2■□□□□ 0.18
CALR-201ENST00000316448 AUHQ13825 339 aaKnown RBP16.2■□□□□ 0.18
CALR-201ENST00000316448 SNX30Q5VWJ9 437 aa16.2■□□□□ 0.18
CALR-201ENST00000316448 LILRA6Q6PI73 481 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms