RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 CRLF3Q8IUI8 442 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 TRIM42Q8IWZ5 723 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 TMEM35BQ8NCS4 154 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 EBF4Q9BQW3 602 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 AGO3Q9H9G7 860 aaKnown RBP17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 PLLPQ9Y342 182 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 SPTLC1O15269 473 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 ATICP31939 592 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 MRPS5P82675 430 aaKnown RBP17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 DPYSL3Q14195 570 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 PTPN20Q4JDL3 420 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 BBS12Q6ZW61 710 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 SLC26A11Q86WA9 606 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 NUDCD3Q8IVD9 361 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 NME8Q8N427 588 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 TTC13Q8NBP0 860 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 CREBZFQ9NS37 354 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 ATXN10Q9UBB4 475 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 SOX13Q9UN79 622 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 SCN1AP35498 2009 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 CITO14578 2027 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 PABPC4LP0CB38 370 aaKnown RBP17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 CYP3A5P20815 502 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 PSMA2P25787 234 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 IL1R2P27930 398 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 CCNFP41002 786 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 EIF3EP60228 445 aaKnown RBP17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 EFHC1Q5JVL4 640 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 TAF2Q6P1X5 1199 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 RNF111Q6ZNA4 994 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 ACOT1Q86TX2 421 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 SLC26A7Q8TE54 656 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 CPXM1Q96SM3 734 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 C20orf27Q9GZN8 174 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 UPF3AQ9H1J1 476 aaKnown RBP17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 PLEKHA5Q9HAU0 1116 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 FAM49BQ9NUQ9 324 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 HBS1LQ9Y450 684 aaKnown RBP17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 TEX264Q9Y6I9 313 aa17.69■□□□□ 0.42
SCAMP4-201ENST00000316097 AQP4P55087 323 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 BMPR2Q13873 1038 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 PABPC1LQ4VXU2 614 aaKnown RBP17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 TEX44Q53QW1 395 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 C9orf57Q5W0N0 161 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 ZCCHC23Q6ZST2 131 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 SATL1Q86VE3 508 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 SPATA24Q86W54 205 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 RFX6Q8HWS3 928 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 LMCD1Q9NZU5 365 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 SRRDQ9UH36 339 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 MICAL2O94851 1124 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 PDGFRBP09619 1106 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 CPOXP36551 454 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 SLC25A11Q02978 314 aaKnown RBP17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 MSLNQ13421 630 aaPredicted RBP17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 AAGABQ6PD74 315 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 C1orf21Q9H246 121 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 DPEP3Q9H4B8 488 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 VRTNQ9H8Y1 702 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 ETNK2Q9NVF9 386 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 ZDHHC7Q9NXF8 308 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 SIRPGQ9P1W8 387 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 PHF24Q9UPV7 400 aa17.68■□□□□ 0.42
SCAMP4-201ENST00000316097 CXorf49A8MYA2 514 aaPredicted RBP17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 M0QYV0 167 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 M0QZ92 97 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 PDLIM1O00151 329 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 TXNDC9O14530 226 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 KRT37O76014 449 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 OR6B1O95007 311 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 SERPINA6P08185 405 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 SNRPAP09012 282 aaKnown RBP17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 RBP3P10745 1247 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 UQCRBP14927 111 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 VAV1P15498 845 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 PEX2P28328 305 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 EPHB1P54762 984 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 YWHAEP62258 255 aaKnown RBP17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 DLG1Q12959 904 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 TBCCQ15814 346 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 CCSAPQ6IQ19 270 aaPredicted RBP17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 ADGRG6Q86SQ4 1221 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 SERINC5Q86VE9 423 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 POU5F2Q8N7G0 328 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 STKLD1Q8NE28 680 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 BEST2Q8NFU1 509 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 NMD3Q96D46 503 aaKnown RBP17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 ADAMTS6Q9UKP5 1117 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 BARX2Q9UMQ3 279 aaPredicted RBP17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 PCDHGC3Q9UN70 934 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 KPNA6O60684 536 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 SORBS2O94875 1100 aaKnown RBP17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 KDELR1P24390 212 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 LMO2P25791 158 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 AXLP30530 894 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 RFC1P35251 1148 aaPredicted RBP17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 SOWAHAQ2M3V2 549 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 RALGPS1Q5JS13 557 aa17.67■□□□□ 0.42
SCAMP4-201ENST00000316097 POLNQ7Z5Q5 900 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms