RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 MTSS1O43312 755 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 DYRK3O43781 588 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 CLK2P49760 499 aaKnown RBP9.23□□□□□ -0.93
CTC1-201ENST00000315684 CCDC197Q8NCU1 140 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 TPCN2Q8NHX9 752 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 TIFAQ96CG3 184 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 WDR24Q96S15 920 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 ANLNQ9NQW6 1124 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 GMFGO60234 142 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 FGF18O76093 207 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 ABCB1P08183 1280 aaPredicted RBP9.23□□□□□ -0.93
CTC1-201ENST00000315684 SPATA31C1P0DKV0 1188 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 POLR2LP62875 67 aaKnown RBP9.23□□□□□ -0.93
CTC1-201ENST00000315684 GRB14Q14449 540 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 PDK2Q15119 407 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 NT5DC1Q5TFE4 455 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 LAYNQ6UX15 382 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 IFNEQ86WN2 208 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 INPP4AQ96PE3 977 aaPredicted RBP9.23□□□□□ -0.93
CTC1-201ENST00000315684 MRPS17Q9Y2R5 130 aaKnown RBP9.23□□□□□ -0.93
CTC1-201ENST00000315684 COL1A2P08123 1366 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 A0A0A6YYK5 440 aaPredicted RBP9.23□□□□□ -0.93
CTC1-201ENST00000315684 GNG14A0A1W2PPG7 69 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 C9IYK1 514 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 KCNA3P22001 575 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 GJA9P57773 515 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 NCALDP61601 193 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 MMRN1Q13201 1228 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 PWP1Q13610 501 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 RAD9BQ6WBX8 426 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 FAM228AQ86W67 206 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 EMID1Q96A84 441 aaPredicted RBP9.23□□□□□ -0.93
CTC1-201ENST00000315684 RSPH9Q9H1X1 276 aaPredicted RBP9.23□□□□□ -0.93
CTC1-201ENST00000315684 NEUROG2Q9H2A3 272 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 CHD4Q14839 1912 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 MYOM1P52179 1685 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 PEX5P50542 639 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 COL9A3Q14050 684 aaPredicted RBP9.23□□□□□ -0.93
CTC1-201ENST00000315684 LRRC8EQ6NSJ5 796 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 FGFR1OP2Q9NVK5 253 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 TMEM161AQ9NX61 479 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 KNDC1Q76NI1 1749 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 PARNO95453 639 aaKnown RBP9.23□□□□□ -0.93
CTC1-201ENST00000315684 NUDT14O95848 222 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 CAPZA2P47755 286 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 PURAQ00577 322 aaKnown RBP9.23□□□□□ -0.93
CTC1-201ENST00000315684 ARHGAP1Q07960 439 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 AARS2Q5JTZ9 985 aaKnown RBP9.23□□□□□ -0.93
CTC1-201ENST00000315684 ZNF366Q8N895 744 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 OR2W6PQ8NHA6 318 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 LGMNQ99538 433 aa9.23□□□□□ -0.93
CTC1-201ENST00000315684 NR1D1P20393 614 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 HTR1BP28222 390 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 SARM1Q6SZW1 724 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 ECHDC2Q86YB7 292 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.22□□□□□ -0.93
CTC1-201ENST00000315684 CPQQ9Y646 472 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 OR6C75A6NL08 312 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 DDX3XO00571 662 aaKnown RBP eCLIP9.22□□□□□ -0.932e-75■□□□□ 10.6
CTC1-201ENST00000315684 SUPT7LO94864 414 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 SPRP35270 261 aaPredicted RBP9.22□□□□□ -0.93
CTC1-201ENST00000315684 CSHL1Q14406 222 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 FUT11Q495W5 492 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 MAP3K21Q5TCX8 1036 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 C11orf63Q6NUN7 778 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 MCOLN2Q8IZK6 566 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 HDDC3Q8N4P3 179 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 SNX10Q9Y5X0 201 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 AKAP12Q02952 1782 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 INPPL1O15357 1258 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 NFATC1O95644 943 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 MIPP30301 263 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 SLC5A3P53794 718 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 KLHL5Q96PQ7 755 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 ACOX2Q99424 681 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.22□□□□□ -0.93
CTC1-201ENST00000315684 ARHGAP26Q9UNA1 814 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 LTBP3Q9NS15 1303 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 H3BQ06 376 aaPredicted RBP9.22□□□□□ -0.93
CTC1-201ENST00000315684 CPSF4O95639 269 aaKnown RBP9.22□□□□□ -0.93
CTC1-201ENST00000315684 CFHP08603 1231 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 ABCG1P45844 678 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 TAF11Q15544 211 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 SLC39A5Q6ZMH5 540 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 HJURPQ8NCD3 748 aaPredicted RBP9.22□□□□□ -0.93
CTC1-201ENST00000315684 HERVK_113Q902F9 699 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 COL26A1Q96A83 441 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 ZMYM5Q9UJ78 669 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 CARNS1A5YM72 827 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 MT-CO1P00395 513 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 CHI3L1P36222 383 aaPredicted RBP9.22□□□□□ -0.93
CTC1-201ENST00000315684 FDFT1P37268 417 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 UGP2Q16851 508 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 AMZ1Q400G9 498 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 SPATA4Q8NEY3 305 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 TSTD1Q8NFU3 115 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 SEMA4DQ92854 862 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 PPP1R2P1Q96PQ5 205 aa9.22□□□□□ -0.93
CTC1-201ENST00000315684 FFAR2O15552 330 aa9.21□□□□□ -0.93
CTC1-201ENST00000315684 IFNA16P05015 189 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms