RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 B3GAT3O94766 335 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 C1QAP02745 245 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 AMHP03971 560 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 THP07101 528 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 TPH1P17752 444 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 CDC25CP30307 473 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 NUMBP49757 651 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 SEMA5AQ13591 1074 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 PPM1JQ5JR12 505 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 RASSF3Q86WH2 238 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 HACE1Q8IYU2 909 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 FAM13CQ8NE31 585 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 LRRC39Q96DD0 335 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 NMUR2Q9GZQ4 415 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 RRAGCQ9HB90 399 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 TMEM30AQ9NV96 361 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.88□□□□□ -0.51
PTPN2-201ENST00000309660 MIOSQ9NXC5 875 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 NOP53Q9NZM5 478 aaKnown RBP11.88□□□□□ -0.51
PTPN2-201ENST00000309660 SLC45A1Q9Y2W3 748 aa11.88□□□□□ -0.51
PTPN2-201ENST00000309660 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.87□□□□□ -0.51
PTPN2-201ENST00000309660 HMX2A2RU54 273 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 DAB1O75553 588 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 ENO1P06733 434 aaKnown RBP11.87□□□□□ -0.51
PTPN2-201ENST00000309660 TPSB2P20231 275 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 SKIV2L2P42285 1042 aaKnown RBP11.87□□□□□ -0.51
PTPN2-201ENST00000309660 ALDH18A1P54886 795 aaKnown RBP11.87□□□□□ -0.51
PTPN2-201ENST00000309660 AQP5P55064 265 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 KDSRQ06136 332 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 TPSAB1Q15661 275 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 OTUD1Q5VV17 481 aaPredicted RBP11.87□□□□□ -0.51
PTPN2-201ENST00000309660 FAM35AQ86V20 835 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 C3orf58Q8NDZ4 430 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 STKLD1Q8NE28 680 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 TTC8Q8TAM2 541 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 ZNF669Q96BR6 464 aaPredicted RBP11.87□□□□□ -0.51
PTPN2-201ENST00000309660 NUDCD1Q96RS6 583 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 CYLDQ9NQC7 956 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 ANLNQ9NQW6 1124 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 FAM105AQ9NUU6 356 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 NUDT5Q9UKK9 219 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 FCHO1O14526 889 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 LYPLA1O75608 230 aaPredicted RBP11.87□□□□□ -0.51
PTPN2-201ENST00000309660 GNAT1P11488 350 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 TYK2P29597 1187 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 RIPK1Q13546 671 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 ATG16L1Q676U5 607 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 SH2D5Q6ZV89 423 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 KDELC2Q7Z4H8 507 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 CMC1Q7Z7K0 106 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 TOP6BLQ8N6T0 577 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 AGR3Q8TD06 166 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 AZIN2Q96A70 460 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 NPY6RQ99463 290 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 PNPLA8Q9NP80 782 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 DLDP09622 509 aaKnown RBP11.87□□□□□ -0.51
PTPN2-201ENST00000309660 DHRS4L1P0CG22 281 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 BDNFP23560 247 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 ADRA1BP35368 520 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 FDFT1P37268 417 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 BRCC3P46736 316 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 MXRA7P84157 204 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 CDK16Q00536 496 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 CRYMQ14894 314 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 N4BP2L1Q5TBK1 243 aaPredicted RBP11.87□□□□□ -0.51
PTPN2-201ENST00000309660 CRLF3Q8IUI8 442 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 OXNAD1Q96HP4 312 aaPredicted RBP11.87□□□□□ -0.51
PTPN2-201ENST00000309660 SMOQ99835 787 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 USP3Q9Y6I4 520 aa11.87□□□□□ -0.51
PTPN2-201ENST00000309660 FAM159BA6NKW6 160 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 OPHN1O60890 802 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 DGKIO75912 1065 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 WARSP23381 471 aaKnown RBP11.86□□□□□ -0.51
PTPN2-201ENST00000309660 CCND1P24385 295 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 WASHC5Q12768 1159 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 RFWD3Q6PCD5 774 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 C4orf22Q6V702 233 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 CHSY1Q86X52 802 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 OLFM3Q96PB7 478 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 KATNAL1Q9BW62 490 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 KCNK13Q9HB14 408 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 ZNF358Q9NW07 568 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 NKX1-2Q9UD57 310 aaPredicted RBP11.86□□□□□ -0.51
PTPN2-201ENST00000309660 ZNF180Q9UJW8 692 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 MTO1Q9Y2Z2 717 aaKnown RBP11.86□□□□□ -0.51
PTPN2-201ENST00000309660 PTPN4P29074 926 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 ADAM17P78536 824 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 STX3Q13277 289 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 NAA25Q14CX7 972 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 FASTKD1Q53R41 847 aaKnown RBP11.86□□□□□ -0.51
PTPN2-201ENST00000309660 TRIM68Q6AZZ1 485 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 PACS1Q6VY07 963 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 ATP2A3Q93084 1043 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 C20orf27Q9GZN8 174 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 TKTL2Q9H0I9 626 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 WDCPQ9H6R7 721 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 XPNPEP3Q9NQH7 507 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 NUP205Q92621 2012 aa11.86□□□□□ -0.51
PTPN2-201ENST00000309660 I6L893 689 aaPredicted RBP11.85□□□□□ -0.51
PTPN2-201ENST00000309660 LTFP02788 710 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms