RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 PITPNM1O00562 1244 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 SOX1O00570 391 aaPredicted RBP5.11□□□□□ -1.59
CAST-201ENST00000309190 SLC26A4O43511 780 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 MED7O43513 233 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 TRUB2O95900 331 aaKnown RBP5.11□□□□□ -1.59
CAST-201ENST00000309190 RARGP13631 454 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 IL1R2P27930 398 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 HSD17B3P37058 310 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 BPIFB4P59827 614 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 NOMO3P69849 1222 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 IRX4P78413 519 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 TSTA3Q13630 321 aaPredicted RBP5.11□□□□□ -1.59
CAST-201ENST00000309190 CYP1B1Q16678 543 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 CCDC38Q502W7 563 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 RASIP1Q5U651 963 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 DARS2Q6PI48 645 aaKnown RBP5.11□□□□□ -1.59
CAST-201ENST00000309190 RHBDF2Q6PJF5 856 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 TRAF7Q6Q0C0 670 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 PDZD4Q76G19 769 aaPredicted RBP5.11□□□□□ -1.59
CAST-201ENST00000309190 SPATS2Q86XZ4 545 aaKnown RBP5.11□□□□□ -1.59
CAST-201ENST00000309190 SH2D3CQ8N5H7 860 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 EFHBQ8N7U6 833 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 FAM71DQ8N9W8 422 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 CASP10Q92851 521 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 VN1R3Q9BXE9 311 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 RNF38Q9H0F5 515 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 NUCKS1Q9H1E3 243 aaKnown RBP5.11□□□□□ -1.59
CAST-201ENST00000309190 MLXIPLQ9NP71 852 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 CWC15Q9P013 229 aaKnown RBP5.11□□□□□ -1.59
CAST-201ENST00000309190 COL1A2P08123 1366 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 NEDD8-MDP1E9PL57 170 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 PIRO00625 290 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 RAD51CO43502 376 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 ATP9BO43861 1147 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 VDRP11473 427 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 PROZP22891 400 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 ADCY8P40145 1251 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 SESN2P58004 480 aaPredicted RBP5.11□□□□□ -1.59
CAST-201ENST00000309190 YWHAEP62258 255 aaKnown RBP5.11□□□□□ -1.59
CAST-201ENST00000309190 CKAP4Q07065 602 aaKnown RBP5.11□□□□□ -1.59
CAST-201ENST00000309190 MAMLD1Q13495 774 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 SEPT6Q14141 434 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 ACAD10Q6JQN1 1059 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 SLC9A9Q8IVB4 645 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 ZNF276Q8N554 614 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 DCLK2Q8N568 766 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 MUC3BQ9H195 1237 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 CAAP1Q9H8G2 361 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 DMAP1Q9NPF5 467 aaPredicted RBP5.11□□□□□ -1.59
CAST-201ENST00000309190 AAASQ9NRG9 546 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 CFAP97Q9P2B7 532 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 KANSL3Q9P2N6 904 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 CIDEBQ9UHD4 219 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 SHOC2Q9UQ13 582 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 R3HDM2Q9Y2K5 976 aaKnown RBP5.11□□□□□ -1.59
CAST-201ENST00000309190 CPQQ9Y646 472 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 NUMBLQ9Y6R0 609 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 ANKRD12Q6UB98 2062 aa5.11□□□□□ -1.59
CAST-201ENST00000309190 ABHD14A-ACY1A0A1B0GW23 586 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 MTMR11A4FU01 709 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 A6NNZ2 444 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 PLK4O00444 970 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 LTFP02788 710 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 RARAP10276 462 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 TCP1P17987 556 aaKnown RBP5.1□□□□□ -1.59
CAST-201ENST00000309190 CST5P28325 142 aaPredicted RBP5.1□□□□□ -1.59
CAST-201ENST00000309190 GPD2P43304 727 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 CCT5P48643 541 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 RAB27AP51159 221 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 KDSRQ06136 332 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 GPS2Q13227 327 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 TUBB8Q3ZCM7 444 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 ARMC12Q5T9G4 340 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 DUPD1Q68J44 220 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 ANKRD33Q7Z3H0 272 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 ANKMY2Q8IV38 441 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 LGI2Q8N0V4 545 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 COLGALT1Q8NBJ5 622 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 ZMIZ2Q8NF64 920 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 CCDC110Q8TBZ0 833 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 SLCO2A1Q92959 643 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 ZSWIM3Q96MP5 696 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 PIGVQ9NUD9 493 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 OSER1Q9NX31 292 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 CNTN3Q9P232 1028 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 PLXNB2O15031 1838 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 H0Y626 953 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 TTI1O43156 1089 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 PRMT3O60678 531 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 CNTN5O94779 1100 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 HLA-EP13747 358 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 AXLP30530 894 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 BMPR1AP36894 532 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 GBE1Q04446 702 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 MGAT5Q09328 741 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 BST2Q10589 180 aaKnown RBP5.1□□□□□ -1.59
CAST-201ENST00000309190 NOMO1Q15155 1222 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 CLEC16AQ2KHT3 1053 aa5.1□□□□□ -1.59
CAST-201ENST00000309190 INTS6LQ5JSJ4 861 aaKnown RBP5.1□□□□□ -1.59
CAST-201ENST00000309190 SEL1L2Q5TEA6 688 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms