RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 SNUPNO95149 360 aaKnown RBP22.59■■□□□ 1.21
TPM4-201ENST00000300933 UPP1Q16831 310 aa22.59■■□□□ 1.21
TPM4-201ENST00000300933 PARP6Q2NL67 630 aa22.59■■□□□ 1.21
TPM4-201ENST00000300933 CDKL3Q8IVW4 592 aaPredicted RBP22.59■■□□□ 1.21
TPM4-201ENST00000300933 RTP3Q9BQQ7 232 aa22.59■■□□□ 1.21
TPM4-201ENST00000300933 POPDC2Q9HBU9 364 aa22.59■■□□□ 1.21
TPM4-201ENST00000300933 SMYD2Q9NRG4 433 aa22.59■■□□□ 1.21
TPM4-201ENST00000300933 IKBKGQ9Y6K9 419 aa22.59■■□□□ 1.21
TPM4-201ENST00000300933 NDC80O14777 642 aa22.59■■□□□ 1.21
TPM4-201ENST00000300933 SEPT4O43236 478 aa22.59■■□□□ 1.21
TPM4-201ENST00000300933 CA12O43570 354 aa22.59■■□□□ 1.21
TPM4-201ENST00000300933 ADAMTS4O75173 837 aa22.59■■□□□ 1.21
TPM4-201ENST00000300933 RBBP5Q15291 538 aaKnown RBP22.59■■□□□ 1.21
TPM4-201ENST00000300933 KLHL38Q2WGJ6 581 aa22.59■■□□□ 1.21
TPM4-201ENST00000300933 HHATQ5VTY9 493 aa22.59■■□□□ 1.21
TPM4-201ENST00000300933 TMEM154Q6P9G4 183 aa22.59■■□□□ 1.21
TPM4-201ENST00000300933 ZNF534Q76KX8 674 aa22.59■■□□□ 1.21
TPM4-201ENST00000300933 MZB1Q8WU39 189 aa22.59■■□□□ 1.21
TPM4-201ENST00000300933 HTR3CQ8WXA8 447 aa22.59■■□□□ 1.21
TPM4-201ENST00000300933 GRAMD1AQ96CP6 724 aa22.59■■□□□ 1.21
TPM4-201ENST00000300933 SLC17A6Q9P2U8 582 aa22.59■■□□□ 1.21
TPM4-201ENST00000300933 DAB1O75553 588 aa22.58■■□□□ 1.21
TPM4-201ENST00000300933 PRKAR2AP13861 404 aaKnown RBP22.58■■□□□ 1.21
TPM4-201ENST00000300933 ATP6V1C1P21283 382 aa22.58■■□□□ 1.21
TPM4-201ENST00000300933 NR1H3Q13133 447 aa22.58■■□□□ 1.21
TPM4-201ENST00000300933 BMPR2Q13873 1038 aa22.58■■□□□ 1.21
TPM4-201ENST00000300933 SPARCL1Q14515 664 aa22.58■■□□□ 1.21
TPM4-201ENST00000300933 PDCD7Q8N8D1 485 aaKnown RBP22.58■■□□□ 1.21
TPM4-201ENST00000300933 TFB1MQ8WVM0 346 aaKnown RBP22.58■■□□□ 1.21
TPM4-201ENST00000300933 DHRS4Q9BTZ2 278 aa22.58■■□□□ 1.21
TPM4-201ENST00000300933 PAPOLBQ9NRJ5 636 aaKnown RBP22.58■■□□□ 1.21
TPM4-201ENST00000300933 IL1RAPL1Q9NZN1 696 aa22.58■■□□□ 1.21
TPM4-201ENST00000300933 NOD1Q9Y239 953 aa22.58■■□□□ 1.21
TPM4-201ENST00000300933 T-ENOLP0DO92 83 aa22.58■■□□□ 1.2
TPM4-201ENST00000300933 MGAT3Q09327 533 aa22.58■■□□□ 1.2
TPM4-201ENST00000300933 SLC7A6OSQ96CW6 309 aaPredicted RBP22.58■■□□□ 1.2
TPM4-201ENST00000300933 PRDM12Q9H4Q4 367 aa22.58■■□□□ 1.2
TPM4-201ENST00000300933 DDIT4Q9NX09 232 aa22.58■■□□□ 1.2
TPM4-201ENST00000300933 RNF186Q9NXI6 227 aa22.58■■□□□ 1.2
TPM4-201ENST00000300933 MAGED2Q9UNF1 606 aaPredicted RBP22.58■■□□□ 1.2
TPM4-201ENST00000300933 CFAP69A5D8W1 941 aa22.57■■□□□ 1.2
TPM4-201ENST00000300933 GPR182O15218 404 aa22.57■■□□□ 1.2
TPM4-201ENST00000300933 PRPF4O43172 522 aaKnown RBP eCLIP22.57■■□□□ 1.22e-10■■□□□ 13.2
TPM4-201ENST00000300933 FESP07332 822 aa22.57■■□□□ 1.2
TPM4-201ENST00000300933 INHBAP08476 426 aa22.57■■□□□ 1.2
TPM4-201ENST00000300933 PAPOLAP51003 745 aaKnown RBP22.57■■□□□ 1.2
TPM4-201ENST00000300933 DAOAP59103 153 aa22.57■■□□□ 1.2
TPM4-201ENST00000300933 LRRTM3Q86VH5 581 aa22.57■■□□□ 1.2
TPM4-201ENST00000300933 SCAMP5Q8TAC9 235 aa22.57■■□□□ 1.2
TPM4-201ENST00000300933 QKIQ96PU8 341 aaKnown RBP eCLIP22.57■■□□□ 1.2
TPM4-201ENST00000300933 DENND2DQ9H6A0 471 aaPredicted RBP22.57■■□□□ 1.2
TPM4-201ENST00000300933 TTLL3Q9Y4R7 772 aa22.57■■□□□ 1.2
TPM4-201ENST00000300933 USH1CQ9Y6N9 552 aa22.57■■□□□ 1.2
TPM4-201ENST00000300933 MT-ND3P03897 115 aa22.57■■□□□ 1.2
TPM4-201ENST00000300933 PYGBP11216 843 aa22.57■■□□□ 1.2
TPM4-201ENST00000300933 LPIN1Q14693 890 aa22.57■■□□□ 1.2
TPM4-201ENST00000300933 MUM1Q2TAK8 710 aa22.57■■□□□ 1.2
TPM4-201ENST00000300933 CASC4Q6P4E1 433 aa22.57■■□□□ 1.2
TPM4-201ENST00000300933 MYLPFQ96A32 169 aa22.57■■□□□ 1.2
TPM4-201ENST00000300933 P2RY11Q96G91 374 aa22.57■■□□□ 1.2
TPM4-201ENST00000300933 CYLDQ9NQC7 956 aa22.57■■□□□ 1.2
TPM4-201ENST00000300933 STAP1Q9ULZ2 295 aa22.57■■□□□ 1.2
TPM4-201ENST00000300933 LHX1P48742 406 aa22.56■■□□□ 1.2
TPM4-201ENST00000300933 SESN2P58004 480 aaPredicted RBP22.56■■□□□ 1.2
TPM4-201ENST00000300933 SREBF2Q12772 1141 aa22.56■■□□□ 1.2
TPM4-201ENST00000300933 UNC5AQ6ZN44 842 aa22.56■■□□□ 1.2
TPM4-201ENST00000300933 ARCQ7LC44 396 aa22.56■■□□□ 1.2
TPM4-201ENST00000300933 COLGALT1Q8NBJ5 622 aa22.56■■□□□ 1.2
TPM4-201ENST00000300933 DNAJC9Q8WXX5 260 aa22.56■■□□□ 1.2
TPM4-201ENST00000300933 NT5C3BQ969T7 300 aa22.56■■□□□ 1.2
TPM4-201ENST00000300933 NUDT5Q9UKK9 219 aa22.56■■□□□ 1.2
TPM4-201ENST00000300933 RNF103O00237 685 aa22.56■■□□□ 1.2
TPM4-201ENST00000300933 EEF2KO00418 725 aaKnown RBP22.56■■□□□ 1.2
TPM4-201ENST00000300933 AHCYL1O43865 530 aa22.56■■□□□ 1.2
TPM4-201ENST00000300933 GCATO75600 419 aa22.56■■□□□ 1.2
TPM4-201ENST00000300933 SCNN1AP37088 669 aa22.56■■□□□ 1.2
TPM4-201ENST00000300933 HACE1Q8IYU2 909 aa22.56■■□□□ 1.2
TPM4-201ENST00000300933 KCTD13Q8WZ19 329 aa22.56■■□□□ 1.2
TPM4-201ENST00000300933 AGAP3Q96P47 875 aa22.56■■□□□ 1.2
TPM4-201ENST00000300933 DNAI2Q9GZS0 605 aa22.56■■□□□ 1.2
TPM4-201ENST00000300933 ETAA1Q9NY74 926 aa22.56■■□□□ 1.2
TPM4-201ENST00000300933 DLGAP2Q9P1A6 1054 aa22.56■■□□□ 1.2
TPM4-201ENST00000300933 KPNA6O60684 536 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 DGKIO75912 1065 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 F7P08709 466 aaPredicted RBP22.55■■□□□ 1.2
TPM4-201ENST00000300933 OR4Q2P0C623 313 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 ZFXP17010 805 aaPredicted RBP22.55■■□□□ 1.2
TPM4-201ENST00000300933 ADRA1BP35368 520 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 NR2C2P49116 596 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 MRPS35P82673 323 aaKnown RBP22.55■■□□□ 1.2
TPM4-201ENST00000300933 SEPT7Q16181 437 aaKnown RBP22.55■■□□□ 1.2
TPM4-201ENST00000300933 UCMAQ8WVF2 138 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 SLC44A1Q8WWI5 657 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 WDR6Q9NNW5 1121 aaKnown RBP22.55■■□□□ 1.2
TPM4-201ENST00000300933 CPSF2Q9P2I0 782 aaKnown RBP22.55■■□□□ 1.2
TPM4-201ENST00000300933 SMG5Q9UPR3 1016 aaKnown RBP22.55■■□□□ 1.2
TPM4-201ENST00000300933 STARD13Q9Y3M8 1113 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 TMEM88BA6NKF7 163 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 AOC2O75106 756 aa22.55■■□□□ 1.2
TPM4-201ENST00000300933 USP12O75317 370 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms