RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 FZD10Q9ULW2 581 aa13.27□□□□□ -0.28
HIF3A-204ENST00000300862 UBQLN1Q9UMX0 589 aaKnown RBP13.27□□□□□ -0.28
HIF3A-204ENST00000300862 DERAQ9Y315 318 aa13.27□□□□□ -0.28
HIF3A-204ENST00000300862 ERVK-10P10266 1014 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 RARBP10826 455 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 DARSP14868 501 aaKnown RBP13.27□□□□□ -0.29
HIF3A-204ENST00000300862 SP100P23497 879 aaPredicted RBP13.27□□□□□ -0.29
HIF3A-204ENST00000300862 RAB27AP51159 221 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 KLC1Q07866 573 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 STX3Q13277 289 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 UBAP2LQ14157 1087 aaKnown RBP13.27□□□□□ -0.29
HIF3A-204ENST00000300862 LBRQ14739 615 aaKnown RBP13.27□□□□□ -0.29
HIF3A-204ENST00000300862 FASTKD1Q53R41 847 aaKnown RBP13.27□□□□□ -0.29
HIF3A-204ENST00000300862 OTUD1Q5VV17 481 aaPredicted RBP13.27□□□□□ -0.29
HIF3A-204ENST00000300862 CRLF3Q8IUI8 442 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 ARRDC4Q8NCT1 418 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 RNF139Q8WU17 664 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 UCMAQ8WVF2 138 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 ARNTL2Q8WYA1 636 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 MTBPQ96DY7 904 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 MAML3Q96JK9 1138 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 ZNF333Q96JL9 665 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 CLPTM1LQ96KA5 538 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 PRDM12Q9H4Q4 367 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 FAM124BQ9H5Z6 455 aaPredicted RBP13.27□□□□□ -0.29
HIF3A-204ENST00000300862 SYBUQ9NX95 663 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 KCNK4Q9NYG8 393 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 SDR42E2A6NKP2 422 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 M0QYT0 321 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 HNRNPCL1O60812 293 aaKnown RBP13.27□□□□□ -0.29
HIF3A-204ENST00000300862 GSRP00390 522 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 CBLBQ13191 982 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 PDE1CQ14123 709 aaPredicted RBP13.27□□□□□ -0.29
HIF3A-204ENST00000300862 KRT72Q14CN4 511 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 N4BP2L1Q5TBK1 243 aaPredicted RBP13.27□□□□□ -0.29
HIF3A-204ENST00000300862 C9orf131Q5VYM1 1079 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 TMEM154Q6P9G4 183 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 GPR142Q7Z601 462 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.27□□□□□ -0.29
HIF3A-204ENST00000300862 RNF169Q8NCN4 708 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 NPLOC4Q8TAT6 608 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 RNF217Q8TC41 542 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 SH3TC2Q8TF17 1288 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 PGBD4Q96DM1 585 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 XPNPEP3Q9NQH7 507 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 EMCNQ9ULC0 261 aa13.27□□□□□ -0.29
HIF3A-204ENST00000300862 HBS1LQ9Y450 684 aaKnown RBP13.27□□□□□ -0.29
HIF3A-204ENST00000300862 SBF1O95248 1867 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 DCAF8L1A6NGE4 600 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 FAM72CH0Y354 149 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 SMIM24O75264 130 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 AMHP03971 560 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 EPHX2P34913 555 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 PGM1P36871 562 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 ABCG1P45844 678 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 PAPOLAP51003 745 aaKnown RBP13.26□□□□□ -0.29
HIF3A-204ENST00000300862 CCDC6Q16204 474 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 TSNAXIP1Q2TAA8 658 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 SLC25A52Q3SY17 297 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 FAM72AQ5TYM5 149 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 FAM72DQ6L9T8 149 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 PACS1Q6VY07 963 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 ATG14Q6ZNE5 492 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 FAM72BQ86X60 149 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.26□□□□□ -0.29
HIF3A-204ENST00000300862 B3GALNT2Q8NCR0 500 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 RBM15BQ8NDT2 890 aaKnown RBP13.26□□□□□ -0.29
HIF3A-204ENST00000300862 SMC1BQ8NDV3 1235 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 DCLRE1BQ9H816 532 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 PAPOLBQ9NRJ5 636 aaKnown RBP13.26□□□□□ -0.29
HIF3A-204ENST00000300862 ZNF358Q9NW07 568 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 DICER1Q9UPY3 1922 aaKnown RBP13.26□□□□□ -0.29
HIF3A-204ENST00000300862 CAPN14A8MX76 684 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 PRR5-ARHGAP8B1AHC4 643 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 ZNF487B1APH4 448 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 HUS1O60921 280 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 SNNO75324 88 aaPredicted RBP13.26□□□□□ -0.29
HIF3A-204ENST00000300862 IL1BP01584 269 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 GSTA2P09210 222 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 TAF6P49848 677 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 ARHGAP8P85298 464 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 WASHC5Q12768 1159 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 RBBP5Q15291 538 aaKnown RBP13.26□□□□□ -0.29
HIF3A-204ENST00000300862 MUM1Q2TAK8 710 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 CWF19L1Q69YN2 538 aaKnown RBP13.26□□□□□ -0.29
HIF3A-204ENST00000300862 C4orf22Q6V702 233 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 STRADAQ7RTN6 431 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 TRIM42Q8IWZ5 723 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 ZNF567Q8N184 647 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 PHC3Q8NDX5 983 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 NRG4Q8WWG1 115 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 IFT43Q96FT9 208 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 ZFP42Q96MM3 310 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 ZNF778Q96MU6 729 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 TINF2Q9BSI4 451 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 TUBB6Q9BUF5 446 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 ANLNQ9NQW6 1124 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 PIGVQ9NUD9 493 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 ETAA1Q9NY74 926 aa13.26□□□□□ -0.29
HIF3A-204ENST00000300862 CCL15-CCL14A0A0B4J2E2 113 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms