RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 SCYL1Q96KG9 808 aa15.05■□□□□ 0
COL6A2-201ENST00000300527 SIGLEC10Q96LC7 697 aa15.05■□□□□ 0
COL6A2-201ENST00000300527 SENP6Q9GZR1 1112 aaPredicted RBP15.05■□□□□ 0
COL6A2-201ENST00000300527 MYO18AQ92614 2054 aaKnown RBP15.05■□□□□ -0
COL6A2-201ENST00000300527 ARHGEF37A1IGU5 675 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 MICAL2O94851 1124 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 TNNC2P02585 160 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 PDGFRBP09619 1106 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 SOX11P35716 441 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 ENTPD1P49961 510 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 ATXN1P54253 815 aaKnown RBP15.05■□□□□ -0
COL6A2-201ENST00000300527 ZNF667Q5HYK9 610 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 ZNF554Q86TJ5 538 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 ATP6V1E2Q96A05 226 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 FRMD8P1Q9BZ68 369 aaPredicted RBP15.05■□□□□ -0
COL6A2-201ENST00000300527 C6orf203Q9P0P8 240 aaPredicted RBP15.05■□□□□ -0
COL6A2-201ENST00000300527 EFR3BQ9Y2G0 817 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 SNX13Q9Y5W8 968 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 H0YCG3 227 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 CCDC166P0CW27 439 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 MX2P20592 715 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 NAA20P61599 178 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 SLC10A2Q12908 348 aaPredicted RBP15.05■□□□□ -0
COL6A2-201ENST00000300527 IL31Q6EBC2 164 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 PLD6Q8N2A8 252 aaKnown RBP15.05■□□□□ -0
COL6A2-201ENST00000300527 LRRC71Q8N4P6 559 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 PQLC3Q8N755 202 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 UBR7Q8N806 425 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 CCNYQ8ND76 341 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 DIS3LQ8TF46 1054 aaKnown RBP15.05■□□□□ -0
COL6A2-201ENST00000300527 TMEM79Q9BSE2 394 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 ZNF518BQ9C0D4 1074 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 COPG2Q9UBF2 871 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 MFHAS1Q9Y4C4 1052 aa15.05■□□□□ -0
COL6A2-201ENST00000300527 NPR1P16066 1061 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 CCND2P30279 289 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 EEPD1Q7L9B9 569 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 NIPA1Q7RTP0 329 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 ZNF410Q86VK4 478 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 CLVS1Q8IUQ0 354 aaPredicted RBP15.04■□□□□ -0
COL6A2-201ENST00000300527 CPNE9Q8IYJ1 553 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 PCDH19Q8TAB3 1148 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 RSL24D1Q9UHA3 163 aaKnown RBP15.04■□□□□ -0
COL6A2-201ENST00000300527 ZNF510Q9Y2H8 683 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 FAM159BA6NKW6 160 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 MED7O43513 233 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 ZNF189O75820 626 aaPredicted RBP15.04■□□□□ -0
COL6A2-201ENST00000300527 FBXO21O94952 628 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 ALDH1B1P30837 517 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 PHKA2P46019 1235 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 NR1H2P55055 460 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 FAM47CQ5HY64 1035 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 SLC9A4Q6AI14 798 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 RNF169Q8NCN4 708 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 PCDHAC1Q9H158 963 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 PCDHA11Q9Y5I1 949 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 PTGER2P43116 358 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 IRF9Q00978 393 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 HEATR6Q6AI08 1181 aaKnown RBP15.04■□□□□ -0
COL6A2-201ENST00000300527 KCNT2Q6UVM3 1135 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 NAPRTQ6XQN6 538 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 ANKRD23Q86SG2 305 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 CCNYL1Q8N7R7 359 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 ATG4CQ96DT6 458 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 SUDS3Q9H7L9 328 aaPredicted RBP15.04■□□□□ -0
COL6A2-201ENST00000300527 PNPLA8Q9NP80 782 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 RRN3Q9NYV6 651 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 HES2Q9Y543 173 aa15.04■□□□□ -0
COL6A2-201ENST00000300527 INO80B-WBP1J3KQ70 363 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 XPOTO43592 962 aaKnown RBP15.03■□□□□ -0
COL6A2-201ENST00000300527 GSRP00390 522 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 CDH2P19022 906 aaPredicted RBP15.03■□□□□ -0
COL6A2-201ENST00000300527 L1CAMP32004 1257 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 CLDN10P78369 228 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 CEACAM7Q14002 265 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 RIN3Q8TB24 985 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 NLRP4Q96MN2 994 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 INO80BQ9C086 356 aaPredicted RBP15.03■□□□□ -0
COL6A2-201ENST00000300527 WDR41Q9HAD4 459 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 THEGQ9P2T0 379 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 STK39Q9UEW8 545 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 CLEC11AQ9Y240 323 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 TPST1O60507 370 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 MT-CO1P00395 513 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 LTFP02788 710 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 GJB1P08034 283 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 AVPR1AP37288 418 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 ANKDD1AQ495B1 522 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 XKR3Q5GH77 459 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 BRSK2Q8IWQ3 736 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 GIPC3Q8TF64 312 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 CIB1Q99828 191 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 SNRNP25Q9BV90 132 aaKnown RBP15.03■□□□□ -0
COL6A2-201ENST00000300527 EPS15L1Q9UBC2 864 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 ZNF70Q9UC06 446 aaPredicted RBP15.03■□□□□ -0
COL6A2-201ENST00000300527 CNTN6Q9UQ52 1028 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 CDY2AQ9Y6F7 541 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 CDY1Q9Y6F8 540 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 NRAPQ86VF7 1730 aa15.03■□□□□ -0
COL6A2-201ENST00000300527 RNASEH2AO75792 299 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms