RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 HLA-EP13747 358 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 ERCC5P28715 1186 aaPredicted RBP14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 CD70P32970 193 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 SHC2P98077 582 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 PTK2Q05397 1052 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 PDCLQ13371 301 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 MAN2A1Q16706 1144 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 PTPRNQ16849 979 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 MS4A13Q5J8X5 152 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 TAC4Q86UU9 113 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 HDDC3Q8N4P3 179 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 ADAM32Q8TC27 787 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 DNASE2BQ8WZ79 361 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 NOX5Q96PH1 765 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 GTPBP2Q9BX10 602 aaKnown RBP14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 GPR174Q9BXC1 333 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 LHX5Q9H2C1 402 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 SLC32A1Q9H598 525 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 STIM2Q9P246 746 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 SLC12A6Q9UHW9 1150 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 DACH1Q9UI36 760 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 PCDHGC3Q9UN70 934 aa14.4□□□□□ -0.1
TMEM41B-201ENST00000299596 MEI4A8MW99 385 aa14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 UPK3BL1B0FP48 263 aa14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 UPK3BL2E5RIL1 263 aa14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 GIPC1O14908 333 aa14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 TRUB2O95900 331 aaKnown RBP14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 ASLP04424 464 aa14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 GLI1P08151 1106 aa14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 SNX16P57768 344 aa14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 APBA1Q02410 837 aa14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 ZBTB16Q05516 673 aa14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 PLEKHG6Q3KR16 790 aa14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 WDTC1Q8N5D0 677 aa14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 WFDC5Q8TCV5 224 aa14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 TTC17Q96AE7 1141 aa14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 PPP1R13BQ96KQ4 1090 aa14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 LMLNQ96KR4 655 aa14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 BTN2A3PQ96KV6 586 aa14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 NUCKS1Q9H1E3 243 aaKnown RBP14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 PCED1AQ9H1Q7 454 aa14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.39□□□□□ -0.11
TMEM41B-201ENST00000299596 METTL12A8MUP2 240 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 OPHN1O60890 802 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 MOCS2O96007 188 aaPredicted RBP14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 IGLV3-25P01717 112 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 SLC2A3P11169 496 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 MAOBP27338 520 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 KRT9P35527 623 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 BPIFB4P59827 614 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 ST8SIA6P61647 398 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 RPS24P62847 133 aaKnown RBP14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 CDK17Q00537 523 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 ZNF252P-AS1Q0IIN9 211 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 SEMA3BQ13214 749 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 CDH18Q13634 790 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 VWA3BQ502W6 1294 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 DCAF6Q58WW2 860 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 ZC3H12AQ5D1E8 599 aaKnown RBP14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 CT47A1Q5JQC4 288 aaPredicted RBP14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 EFHC1Q5JVL4 640 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 CARNMT1Q8N4J0 409 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 ATP6V0D2Q8N8Y2 350 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 KDM1BQ8NB78 822 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 PRICKLE1Q96MT3 831 aaPredicted RBP14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 CPXM1Q96SM3 734 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 TUBGCP2Q9BSJ2 902 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 ZDHHC5Q9C0B5 715 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 NDST4Q9H3R1 872 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 PRSS16Q9NQE7 514 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 FSCN3Q9NQT6 498 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 ASNSD1Q9NWL6 643 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 TJP2Q9UDY2 1190 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 DNAJC12Q9UKB3 198 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 GON4LQ3T8J9 2241 aa14.38□□□□□ -0.11
TMEM41B-201ENST00000299596 TNRC6BQ9UPQ9 1833 aaKnown RBP14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 A0A1B0GTW7 788 aa14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 KCNU1A8MYU2 1149 aa14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 H0Y626 953 aa14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 FOXN3O00409 490 aaPredicted RBP14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 LUC7L3O95232 432 aaKnown RBP14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 MOCS3O95396 460 aa14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 SLC14A1Q13336 389 aa14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 EIF4EBP2Q13542 120 aaPredicted RBP14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 TAF5Q15542 800 aa14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 DPCR1Q3MIW9 517 aa14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 DCAF12L1Q5VU92 463 aa14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 CACUL1Q86Y37 369 aa14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 LGI2Q8N0V4 545 aa14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 CFAP52Q8N1V2 620 aa14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 MINDY1Q8N5J2 469 aa14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 ZNF366Q8N895 744 aa14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 DEFB124Q8NES8 71 aa14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 NUP62CLQ9H1M0 184 aa14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 SIX2Q9NPC8 291 aa14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 KIAA1522Q9P206 1035 aaPredicted RBP14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 CEP83Q9Y592 693 aa14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 ACACBO00763 2458 aa14.37□□□□□ -0.11
TMEM41B-201ENST00000299596 TPRP12270 2363 aaKnown RBP14.36□□□□□ -0.11
TMEM41B-201ENST00000299596 HSF2BPO75031 334 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms