RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 TRIM50Q86XT4 487 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 MARVELD2Q8N4S9 558 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 APBB2Q92870 758 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 TMIGD2Q96BF3 282 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 HSFX1Q9UBD0 423 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 TFPTP0C1Z6 253 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 MYL4P12829 197 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 PRKCHP24723 683 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 SLC5A2P31639 672 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 SOX11P35716 441 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 MAGEA10P43363 369 aaPredicted RBP11.7□□□□□ -0.54
TRUB1-201ENST00000298746 MYBPC1Q00872 1141 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 TMEM62Q0P6H9 643 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 ATP1A4Q13733 1029 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 SEPT6Q14141 434 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 CCDC142Q17RM4 750 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 TMEM198Q66K66 360 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 KCNT2Q6UVM3 1135 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 PACS1Q6VY07 963 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 EEPD1Q7L9B9 569 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 NIPA2Q8N8Q9 360 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 RNF149Q8NC42 400 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 CMASQ8NFW8 434 aaPredicted RBP11.7□□□□□ -0.54
TRUB1-201ENST00000298746 RMND5BQ96G75 393 aaPredicted RBP11.7□□□□□ -0.54
TRUB1-201ENST00000298746 RTKNQ9BST9 563 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 TASP1Q9H6P5 420 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 ZNF302Q9NR11 478 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 TBC1D23Q9NUY8 699 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 AURKCQ9UQB9 309 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 RNF103-CHMP3A0A140T963 221 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 AKAP10O43572 662 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 USP12O75317 370 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 P4HA1P13674 534 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 HSPA13P48723 471 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 PLOD1Q02809 727 aaPredicted RBP11.7□□□□□ -0.54
TRUB1-201ENST00000298746 GBE1Q04446 702 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 SFSWAPQ12872 951 aaKnown RBP11.7□□□□□ -0.54
TRUB1-201ENST00000298746 OGFRL1Q5TC84 451 aaPredicted RBP11.7□□□□□ -0.54
TRUB1-201ENST00000298746 SEL1L3Q68CR1 1132 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 LRRC8EQ6NSJ5 796 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 GPR141Q7Z602 305 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 XYLT1Q86Y38 959 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 GAB3Q8WWW8 586 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 ZNF669Q96BR6 464 aaPredicted RBP11.7□□□□□ -0.54
TRUB1-201ENST00000298746 GCOM2Q9BZD3 368 aaPredicted RBP11.7□□□□□ -0.54
TRUB1-201ENST00000298746 HAPLN2Q9GZV7 340 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 SDCBP2Q9H190 292 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 EFCAB1Q9HAE3 211 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 PCDHA11Q9Y5I1 949 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 PSAT1Q9Y617 370 aa11.7□□□□□ -0.54
TRUB1-201ENST00000298746 A0A1B0GTW7 788 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 RGSL1A5PLK6 1076 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 GOLGA8TH3BQL2 631 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 GPC4O75487 556 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 ENTPD1P49961 510 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 TGFB2P61812 414 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 PCLAFQ15004 111 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 ZFP1Q6P2D0 407 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 PGM2L1Q6PCE3 622 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 ZBTB8OSQ8IWT0 167 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 AHI1Q8N157 1196 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 UBR7Q8N806 425 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 ADCY4Q8NFM4 1077 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 ATP6V1E2Q96A05 226 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 LRRC39Q96DD0 335 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 ERLEC1Q96DZ1 483 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 PEBP4Q96S96 227 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 NPAS2Q99743 824 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 CIB1Q99828 191 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 STN1Q9H668 368 aaKnown RBP11.69□□□□□ -0.54
TRUB1-201ENST00000298746 CAB39LQ9H9S4 337 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 PFDN4Q9NQP4 134 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 GTSE1Q9NYZ3 720 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 CYTH4Q9UIA0 394 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 MYRFQ9Y2G1 1151 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 XPOTO43592 962 aaKnown RBP11.69□□□□□ -0.54
TRUB1-201ENST00000298746 MICAL2O94851 1124 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 MPSTP25325 297 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 CNTFP26441 200 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 PTPN11Q06124 597 aaPredicted RBP11.69□□□□□ -0.54
TRUB1-201ENST00000298746 ADRM1Q16186 407 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 STRA8Q7Z7C7 330 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 ZNF410Q86VK4 478 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 WDR49Q8IV35 697 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 CLEC4DQ8WXI8 215 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 SGF29Q96ES7 293 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 EFHD1Q9BUP0 239 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 MRPL4Q9BYD3 311 aaKnown RBP11.69□□□□□ -0.54
TRUB1-201ENST00000298746 DNAJC28Q9NX36 388 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 GMEB1Q9Y692 573 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 STRCP1A6NGW2 1772 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 CDK5RAP2Q96SN8 1893 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 ALDOAP04075 364 aaKnown RBP11.69□□□□□ -0.54
TRUB1-201ENST00000298746 CYP2F1P24903 491 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 ABCD1P33897 745 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 ETFBP38117 255 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 MAGEA8P43361 318 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 CDKL1Q00532 357 aa11.69□□□□□ -0.54
TRUB1-201ENST00000298746 IFRD2Q12894 506 aaPredicted RBP11.69□□□□□ -0.54
TRUB1-201ENST00000298746 BOLA3Q53S33 107 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms