RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 LRRC40Q9H9A6 602 aa10.29□□□□□ -0.76
TNFRSF11B-201ENST00000297350 GPAMQ9HCL2 828 aa10.29□□□□□ -0.76
TNFRSF11B-201ENST00000297350 SLC38A7Q9NVC3 462 aa10.29□□□□□ -0.76
TNFRSF11B-201ENST00000297350 SETD4Q9NVD3 440 aa10.29□□□□□ -0.76
TNFRSF11B-201ENST00000297350 DNAJC28Q9NX36 388 aa10.29□□□□□ -0.76
TNFRSF11B-201ENST00000297350 NKX1-2Q9UD57 310 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF11B-201ENST00000297350 ANGPTL2Q9UKU9 493 aa10.29□□□□□ -0.76
TNFRSF11B-201ENST00000297350 CORO1CQ9ULV4 474 aaPredicted RBP10.29□□□□□ -0.76
TNFRSF11B-201ENST00000297350 FAM237BA0A1B0GVD1 139 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 MFSD11O43934 449 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 PLIN3O60664 434 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 F9P00740 461 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 PAX3P23760 479 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 PGM1P36871 562 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 MAGEA12P43365 314 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 PTDSS1P48651 473 aaKnown RBP10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 SERPINB8P50452 374 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 SLC34A1Q06495 639 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 BMPR2Q13873 1038 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 FAM110CQ1W6H9 321 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 FASTKD1Q53R41 847 aaKnown RBP10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 MBLAC2Q68D91 279 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 TRMT10BQ6PF06 316 aaKnown RBP10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 GPR142Q7Z601 462 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 PLEKHH3Q7Z736 793 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 PIGZQ86VD9 579 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 DEFB106AQ8N104 65 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 TMEM130Q8N3G9 435 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 PPFIBP2Q8ND30 876 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 PIWIL2Q8TC59 973 aaKnown RBP10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 P2RY11Q96G91 374 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 PPP1R2P1Q96PQ5 205 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 KATNAL1Q9BW62 490 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 LRRC4Q9HBW1 653 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 XPNPEP3Q9NQH7 507 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 FBXO6Q9NRD1 293 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 DONSONQ9NYP3 566 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 PPARGC1AQ9UBK2 798 aaKnown RBP10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 WDR27A2RRH5 827 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 EEF2KO00418 725 aaKnown RBP10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 NVLO15381 856 aaKnown RBP10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 MPOP05164 745 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 APOA4P06727 396 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 ITGA2BP08514 1039 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 TFE3P19532 575 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 CRYBB1P53674 252 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 PRKAA2P54646 552 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 CSE1LP55060 971 aaKnown RBP10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 AQP5P55064 265 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 SNX17Q15036 470 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 ARL13BQ3SXY8 428 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 CASC4Q6P4E1 433 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 RFX8Q6ZV50 586 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 CLEC4CQ8WTT0 213 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 DNAJC9Q8WXX5 260 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 FAM49AQ9H0Q0 323 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 CNGB3Q9NQW8 809 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 ZFATQ9P243 1243 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 APOBEC2Q9Y235 224 aaKnown RBP10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 PIN4Q9Y237 131 aaKnown RBP10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 Q9Y3F1 56 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 PTCH2Q9Y6C5 1203 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 NUMBLQ9Y6R0 609 aa10.28□□□□□ -0.76
TNFRSF11B-201ENST00000297350 TMEM114B3SHH9 223 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 GABRDO14764 452 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 DCLK1O15075 740 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 ENTPD5O75356 428 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 TM7SF2O76062 418 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 PSMG1O95456 288 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 AP2A1O95782 977 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 FAM200BP0CF97 657 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 GNAT1P11488 350 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 SKIP12755 728 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 PTPN1P18031 435 aaKnown RBP10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 PRDX6P30041 224 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 HTR7P34969 479 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 SERPINB6P35237 376 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 SPRP35270 261 aaPredicted RBP10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 LHX1P48742 406 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 NPY2RP49146 381 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 LILRA4P59901 499 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 ADAM17P78536 824 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 DEUP1Q05D60 604 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 ADIGQ0VDE8 80 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 AP1B1Q10567 949 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 SYCP2LQ5T4T6 812 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 RINLQ6ZS11 566 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 RASSF3Q86WH2 238 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 MPP5Q8N3R9 675 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 PDCD7Q8N8D1 485 aaKnown RBP10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 FAM149B1Q96BN6 582 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 CERS2Q96G23 380 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 OSMRQ99650 979 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 CCDC106Q9BWC9 280 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 BFARQ9NZS9 450 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 LRCH1Q9Y2L9 728 aa10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 COL4A4P53420 1690 aaPredicted RBP10.27□□□□□ -0.76
TNFRSF11B-201ENST00000297350 CCL15-CCL14A0A0B4J2E2 113 aa10.27□□□□□ -0.77
TNFRSF11B-201ENST00000297350 B2RBV5 119 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms