RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 LGMNQ99538 433 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 TMEM134Q9H6X4 195 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 CCL15-CCL14A0A0B4J2E2 113 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 PSMG1O95456 288 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 RALBP11234 206 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 GRIK1P39086 918 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 CDKN2BP42772 138 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 WDR4P57081 412 aaKnown RBP12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 CCL15Q16663 113 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 MTHFD1LQ6UB35 978 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 HDDC2Q7Z4H3 204 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 TLK2Q86UE8 772 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 ZC3H3Q8IXZ2 948 aaKnown RBP12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 MTERF3Q96E29 417 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 ST6GALNAC4Q9H4F1 302 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 CYP3A43Q9HB55 503 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 CHST12Q9NRB3 414 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 ZNF541Q9H0D2 1346 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 SAC3D1A6NKF1 404 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 PLA2G6O60733 806 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 USP1O94782 785 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 FARP2O94887 1054 aaPredicted RBP12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 ETFBP38117 255 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 OAZ1P54368 228 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 USP4Q13107 963 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 SPRED3Q2MJR0 410 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 B3GNT6Q6ZMB0 384 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 BNC2Q6ZN30 1099 aaPredicted RBP12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 ERO1BQ86YB8 467 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 SNX19Q92543 992 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 NDRG1Q92597 394 aaKnown RBP12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 TUBGCP3Q96CW5 907 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 ACSS3Q9H6R3 686 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 EFCAB1Q9HAE3 211 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 ETNK2Q9NVF9 386 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 CDYLQ9Y232 598 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 COQ4Q9Y3A0 265 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 RNF103O00237 685 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 RAG1P15918 1043 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 GTF2A2P52657 109 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 SP2Q02086 613 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 DGKDQ16760 1214 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 KYAT1Q16773 422 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 FBXO47Q5MNV8 452 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 FRA10AC1Q70Z53 315 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 TMEM192Q8IY95 271 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 ZNF317Q96PQ6 595 aaPredicted RBP12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 RNF157Q96PX1 679 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 MMADHCQ9H3L0 296 aaPredicted RBP12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 NUDT5Q9UKK9 219 aa12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 UBQLN1Q9UMX0 589 aaKnown RBP12.85□□□□□ -0.35
SLC6A1-201ENST00000287766 TUBGCP6Q96RT7 1819 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 CYB561D2O14569 222 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 TNFAIP8O95379 198 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 PARNO95453 639 aaKnown RBP12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 ATP6V1C1P21283 382 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 CDK16Q00536 496 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 SNAPC2Q13487 334 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 LRRC38Q5VT99 294 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 RNF43Q68DV7 783 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 HORMAD1Q86X24 394 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 ATPAF2Q8N5M1 289 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 HTR3CQ8WXA8 447 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 DMAP1Q9NPF5 467 aaPredicted RBP12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 SCN3BQ9NY72 215 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 SOX13Q9UN79 622 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 MYH14Q7Z406 1995 aaKnown RBP12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 CD4P01730 458 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 CYP1A1P04798 512 aaPredicted RBP12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 THRAP10827 490 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 CPA3P15088 417 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 GRK2P25098 689 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 BCAT1P54687 386 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 MAP3K10Q02779 954 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 FSTL1Q12841 308 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 CEP78Q5JTW2 689 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 ZNF484Q5JVG2 852 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 C1orf220Q5T0J3 134 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 ADGRF2Q8IZF7 708 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 DNAJB3Q8WWF6 145 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 RMND5BQ96G75 393 aaPredicted RBP12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 SLC13A4Q9UKG4 626 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 PTPRJQ12913 1337 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 DPPA5A6NC42 116 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 DCXO43602 365 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 GLRA3O75311 464 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 RASSF9O75901 435 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 B3GAT3O94766 335 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 FKBP9O95302 570 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 PAEPP09466 180 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 HADHBP55084 474 aaKnown RBP12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 SLC6A3Q01959 620 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 TRAF2Q12933 501 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 FKBP9P1Q75LS8 142 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 PIGWQ7Z7B1 504 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 KLHL23Q8NBE8 558 aa12.84□□□□□ -0.35
SLC6A1-201ENST00000287766 STKLD1Q8NE28 680 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms