RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 IFNEQ86WN2 208 aa13.55□□□□□ -0.24
PRDM16-201ENST00000270722 MYCBPAPQ8TBZ2 947 aa13.55□□□□□ -0.24
PRDM16-201ENST00000270722 SAV1Q9H4B6 383 aaPredicted RBP13.55□□□□□ -0.24
PRDM16-201ENST00000270722 EFCAB1Q9HAE3 211 aa13.55□□□□□ -0.24
PRDM16-201ENST00000270722 FANCFQ9NPI8 374 aa13.55□□□□□ -0.24
PRDM16-201ENST00000270722 LRRC4BQ9NT99 713 aa13.55□□□□□ -0.24
PRDM16-201ENST00000270722 POFUT2Q9Y2G5 429 aa13.55□□□□□ -0.24
PRDM16-201ENST00000270722 ITIH6Q6UXX5 1313 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 A0A1W2PQ72 361 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 AVILO75366 819 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 APOC1P02654 83 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 RBP3P10745 1247 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 HOXB6P17509 224 aaKnown RBP13.54□□□□□ -0.24
PRDM16-201ENST00000270722 RESTQ13127 1097 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 TNFAIP8L3Q5GJ75 292 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 SPATA5L1Q9BVQ7 753 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 A0A0X1KG70 313 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 C2CD2LO14523 706 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 FAM58BPP0C7Q3 252 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 TPBGLP0DKB5 382 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 RFX8Q6ZV50 586 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 AXIN2Q9Y2T1 843 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 ATXN2Q99700 1313 aaKnown RBP13.54□□□□□ -0.24
PRDM16-201ENST00000270722 A0A087X0T9 212 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 SDR42E2A6NKP2 422 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 GFPT1Q06210 699 aaPredicted RBP13.54□□□□□ -0.24
PRDM16-201ENST00000270722 ZNF543Q08ER8 600 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 BNIPLQ7Z465 357 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 KDELC2Q7Z4H8 507 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 DHX40Q8IX18 779 aaKnown RBP13.54□□□□□ -0.24
PRDM16-201ENST00000270722 INTS7Q9NVH2 962 aaKnown RBP13.54□□□□□ -0.24
PRDM16-201ENST00000270722 ZNF224Q9NZL3 707 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 KRT33AO76009 404 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 MYL12AP19105 171 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 KDSRQ06136 332 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 CYP2A13Q16696 494 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 TIMM50Q3ZCQ8 353 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 NKX2-3Q8TAU0 364 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 ZNF669Q96BR6 464 aaPredicted RBP13.54□□□□□ -0.24
PRDM16-201ENST00000270722 CITO14578 2027 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 LAMC1P11047 1609 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 ZNF7P17097 686 aaPredicted RBP13.54□□□□□ -0.24
PRDM16-201ENST00000270722 ZMYND11Q15326 602 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 NOL9Q5SY16 702 aaKnown RBP13.54□□□□□ -0.24
PRDM16-201ENST00000270722 C11orf57Q6ZUT1 292 aaPredicted RBP13.54□□□□□ -0.24
PRDM16-201ENST00000270722 ADARB2Q9NS39 739 aaKnown RBP13.54□□□□□ -0.24
PRDM16-201ENST00000270722 TUBE1Q9UJT0 475 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 C15orf41Q9Y2V0 281 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 H3BNH8 94 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 NUDT14O95848 222 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 ARF4P18085 180 aaPredicted RBP13.54□□□□□ -0.24
PRDM16-201ENST00000270722 LIN54Q6MZP7 749 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 PFDN5Q99471 154 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 OSBPL8Q9BZF1 889 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 MTMR4Q9NYA4 1195 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 SYNPO2Q9UMS6 1093 aa13.54□□□□□ -0.24
PRDM16-201ENST00000270722 ATP6V1G1O75348 118 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 KRT34O76011 436 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 LTKP29376 864 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 COPAP53621 1224 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 C5orf22Q49AR2 442 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 ZDHHC17Q8IUH5 632 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 GRAMD1CQ8IYS0 662 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 BORCS5Q969J3 196 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 MRTO4Q9UKD2 239 aaKnown RBP13.53□□□□□ -0.24
PRDM16-201ENST00000270722 VIRMAQ69YN4 1812 aaKnown RBP13.53□□□□□ -0.24
PRDM16-201ENST00000270722 KCNQ3O43525 872 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 ATL1Q8WXF7 558 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 RETREG1Q9H6L5 497 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 LSM8O95777 96 aaKnown RBP13.53□□□□□ -0.24
PRDM16-201ENST00000270722 IGSF6O95976 241 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 TRIM23P36406 574 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 AP1S1P61966 158 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 XRCC4Q13426 336 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 USP41Q3LFD5 358 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 IRGCQ6NXR0 463 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 CASP12Q6UXS9 341 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 CENPLQ8N0S6 344 aaPredicted RBP13.53□□□□□ -0.24
PRDM16-201ENST00000270722 COX4I2Q96KJ9 171 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 CAPN10Q9HC96 672 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 FKBP6O75344 327 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 LRRC40Q9H9A6 602 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 GLP2RO95838 553 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 GOLGA7BQ2TAP0 167 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 LRRC17Q8N6Y2 441 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 ACMSDQ8TDX5 336 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 CLP1Q92989 425 aaKnown RBP13.53□□□□□ -0.24
PRDM16-201ENST00000270722 PHB2Q99623 299 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 DPP3Q9NY33 737 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 C15orf38-AP3S2A0A0A6YYH1 394 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 OR56A5P0C7T3 313 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 VEGFAP15692 232 aaPredicted RBP13.53□□□□□ -0.24
PRDM16-201ENST00000270722 MAPK9P45984 424 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 C1orf94Q6P1W5 598 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 ARPINQ7Z6K5 226 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 RP9Q8TA86 221 aaKnown RBP13.53□□□□□ -0.24
PRDM16-201ENST00000270722 LENG9Q96B70 501 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 ACTR8Q9H981 624 aa13.53□□□□□ -0.24
PRDM16-201ENST00000270722 SUCOQ9UBS9 1254 aaKnown RBP13.53□□□□□ -0.24
PRDM16-201ENST00000270722 SLC12A4Q9UP95 1085 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms