RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 LRCH1Q9Y2L9 728 aa12.81□□□□□ -0.36
BEST3-201ENST00000266661 A6NJR5 290 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 PRR5-ARHGAP8B1AHC4 643 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 H3BRJ5 948 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 PIRO00625 290 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 ZNF195O14628 629 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 CAPN15O75808 1086 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 NPTXRO95502 500 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 ZNF286BP0CG31 522 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 ALOX15P16050 662 aaPredicted RBP12.8□□□□□ -0.36
BEST3-201ENST00000266661 GOT1P17174 413 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 ARRB2P32121 409 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 MAGEA12P43365 314 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 ACTR3P61158 418 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 ARHGAP8P85298 464 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 THOC5Q13769 683 aaKnown RBP12.8□□□□□ -0.36
BEST3-201ENST00000266661 PCLAFQ15004 111 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 C9orf57Q5W0N0 161 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 HEATR6Q6AI08 1181 aaKnown RBP12.8□□□□□ -0.36
BEST3-201ENST00000266661 C16orf46Q6P387 395 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 ZCCHC23Q6ZST2 131 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 DENND5BQ6ZUT9 1274 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 MAVSQ7Z434 540 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 HACE1Q8IYU2 909 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 CCDC33Q8N5R6 958 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 GPRC5AQ8NFJ5 357 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 TFB1MQ8WVM0 346 aaKnown RBP12.8□□□□□ -0.36
BEST3-201ENST00000266661 ISL2Q96A47 359 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 IFT43Q96FT9 208 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 HSFY1Q96LI6 401 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 PANX3Q96QZ0 392 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 CFHR5Q9BXR6 569 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 VTA1Q9NP79 307 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 XPNPEP3Q9NQH7 507 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 DDX43Q9NXZ2 648 aaKnown RBP12.8□□□□□ -0.36
BEST3-201ENST00000266661 SLC17A6Q9P2U8 582 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 DNAJB4Q9UDY4 337 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 SLC7A8Q9UHI5 535 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 WASF2Q9Y6W5 498 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 SF3B1O75533 1304 aaKnown RBP eCLIP12.8□□□□□ -0.36
BEST3-201ENST00000266661 SPECC1L-ADORA2AF8WAN1 911 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 SPTLC1O15269 473 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 GLRA3O75311 464 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 PROCP04070 461 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 CCDC130P13994 396 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 DESP17661 470 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 GLUD2P49448 558 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 BCAT1P54687 386 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 INSCQ1MX18 579 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 FAM110CQ1W6H9 321 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 MUM1Q2TAK8 710 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 TRMT5Q32P41 509 aaKnown RBP12.8□□□□□ -0.36
BEST3-201ENST00000266661 DNAL1Q4LDG9 190 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 CCNJLQ8IV13 435 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 SCUBE1Q8IWY4 988 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 ULK2Q8IYT8 1036 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 PDCD7Q8N8D1 485 aaKnown RBP12.8□□□□□ -0.36
BEST3-201ENST00000266661 SORT1Q99523 831 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 LGMNQ99538 433 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 EIF2AQ9BY44 585 aaKnown RBP12.8□□□□□ -0.36
BEST3-201ENST00000266661 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.8□□□□□ -0.36
BEST3-201ENST00000266661 MARCOQ9UEW3 520 aaPredicted RBP12.8□□□□□ -0.36
BEST3-201ENST00000266661 PSAT1Q9Y617 370 aa12.8□□□□□ -0.36
BEST3-201ENST00000266661 A0A088AWK7 358 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 H3BRB1 525 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 TPP1O14773 563 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 MFSD11O43934 449 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 OPHN1O60890 802 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 GPR32O75388 356 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 KITP10721 976 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 PGAM1P18669 254 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 LMO2P25791 158 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 MATKP42679 507 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 ACADSBP45954 432 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 SARNPP82979 210 aaKnown RBP12.79□□□□□ -0.36
BEST3-201ENST00000266661 KLC1Q07866 573 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 GRIK4Q16099 956 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 CCDC6Q16204 474 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 N4BP2L1Q5TBK1 243 aaPredicted RBP12.79□□□□□ -0.36
BEST3-201ENST00000266661 TMCO4Q5TGY1 634 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 RIPOR1Q6ZS17 1223 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 APLFQ8IW19 511 aaPredicted RBP12.79□□□□□ -0.36
BEST3-201ENST00000266661 COLGALT1Q8NBJ5 622 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 OR6B3Q8NGW1 331 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 PIWIL2Q8TC59 973 aaKnown RBP12.79□□□□□ -0.36
BEST3-201ENST00000266661 UCMAQ8WVF2 138 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 GATA6Q92908 595 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 FAM161BQ96MY7 647 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 TUT1Q9H6E5 874 aaKnown RBP12.79□□□□□ -0.36
BEST3-201ENST00000266661 GPAMQ9HCL2 828 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 GDAP2Q9NXN4 497 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 TRIP11Q15643 1979 aa12.79□□□□□ -0.36
BEST3-201ENST00000266661 FKTNO75072 461 aa12.78□□□□□ -0.36
BEST3-201ENST00000266661 LYPLA1O75608 230 aaPredicted RBP12.78□□□□□ -0.36
BEST3-201ENST00000266661 MGAT1P26572 445 aa12.78□□□□□ -0.36
BEST3-201ENST00000266661 TKTP29401 623 aaKnown RBP12.78□□□□□ -0.36
BEST3-201ENST00000266661 HARS2P49590 506 aaKnown RBP12.78□□□□□ -0.36
BEST3-201ENST00000266661 PSEN1P49768 467 aa12.78□□□□□ -0.36
BEST3-201ENST00000266661 SESN3P58005 492 aa12.78□□□□□ -0.36
BEST3-201ENST00000266661 RPL10AP62906 217 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms