RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 PDCD7Q8N8D1 485 aaKnown RBP13.99□□□□□ -0.17
VMP1-201ENST00000262291 SPOCK2Q92563 424 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 AGAP3Q96P47 875 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 FAM193BQ96PV7 902 aaPredicted RBP13.99□□□□□ -0.17
VMP1-201ENST00000262291 UNC93B1Q9H1C4 597 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 UGT1A7Q9HAW7 530 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 UGT1A10Q9HAW8 530 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 UGT1A8Q9HAW9 530 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 FGFR1OP2Q9NVK5 253 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 GGT7Q9UJ14 662 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 FBXW11Q9UKB1 542 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 TRIM17Q9Y577 477 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 TEX264Q9Y6I9 313 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 MOXD2PA6NHM9 499 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 CXorf49A8MYA2 514 aaPredicted RBP13.99□□□□□ -0.17
VMP1-201ENST00000262291 CHADO15335 359 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 MOCS2O96007 188 aaPredicted RBP13.99□□□□□ -0.17
VMP1-201ENST00000262291 CYP11A1P05108 521 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 DPYSQ14117 519 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 GPNMBQ14956 572 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 RWDD4Q6NW29 188 aaKnown RBP13.99□□□□□ -0.17
VMP1-201ENST00000262291 LRRC8DQ7L1W4 858 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 COLGALT1Q8NBJ5 622 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 DQX1Q8TE96 717 aaKnown RBP13.99□□□□□ -0.17
VMP1-201ENST00000262291 RTP4Q96DX8 246 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 OLFM3Q96PB7 478 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 CSNK1G1Q9HCP0 422 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 IL1RAPL1Q9NZN1 696 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 SLC17A6Q9P2U8 582 aa13.99□□□□□ -0.17
VMP1-201ENST00000262291 TSC2P49815 1807 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 CFAP69A5D8W1 941 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 ARVCFO00192 962 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 MGRN1O60291 552 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 USP12O75317 370 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 TADA2AO75478 443 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 ANP32DO95626 131 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 F7P08709 466 aaPredicted RBP13.98□□□□□ -0.17
VMP1-201ENST00000262291 PSMB4P28070 264 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 STX2P32856 288 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 RPA3P35244 121 aaPredicted RBP13.98□□□□□ -0.17
VMP1-201ENST00000262291 WDR4P57081 412 aaKnown RBP13.98□□□□□ -0.17
VMP1-201ENST00000262291 SESN2P58004 480 aaPredicted RBP13.98□□□□□ -0.17
VMP1-201ENST00000262291 MTFR1Q15390 333 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 ZNF534Q76KX8 674 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 COLGALT2Q8IYK4 626 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 CACNA2D3Q8IZS8 1091 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 ATAD1Q8NBU5 361 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 NMUR1Q9HB89 426 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 PLAC1Q9HBJ0 212 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 PSMC3IPQ9P2W1 217 aaPredicted RBP13.98□□□□□ -0.17
VMP1-201ENST00000262291 ZC3H7BQ9UGR2 993 aaKnown RBP13.98□□□□□ -0.17
VMP1-201ENST00000262291 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.98□□□□□ -0.17
VMP1-201ENST00000262291 WDR91A4D1P6 747 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 FAM163BP0C2L3 166 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 KRT4P19013 534 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 EPHB2P29323 1055 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 PHBP35232 272 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 MSH2P43246 934 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 CCL23P55773 120 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 CASC4Q6P4E1 433 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 TRMT10BQ6PF06 316 aaKnown RBP13.98□□□□□ -0.17
VMP1-201ENST00000262291 PPM1NQ8N819 430 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 MAB21L3Q8N8X9 362 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 CENPTQ96BT3 561 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 ACSS3Q9H6R3 686 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 ALG13Q9NP73 1137 aaKnown RBP13.98□□□□□ -0.17
VMP1-201ENST00000262291 NKIRAS1Q9NYS0 192 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 OR12D3Q9UGF7 316 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 SLC27A5Q9Y2P5 690 aa13.98□□□□□ -0.17
VMP1-201ENST00000262291 DCLK1O15075 740 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 GCATO75600 419 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 SKIP12755 728 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 FOXN2P32314 431 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 NR2C2P49116 596 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 XRCC4Q13426 336 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 SLC1A5Q15758 541 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 CES3Q6UWW8 571 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 FAM47EQ6ZV65 393 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 TBC1D1Q86TI0 1168 aaPredicted RBP13.97□□□□□ -0.17
VMP1-201ENST00000262291 URGCPQ8TCY9 931 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 MAGEC3Q8TD91 643 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 USP33Q8TEY7 942 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 DCAKDQ8WVC6 231 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 FAM167BQ9BTA0 163 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 GRID1Q9ULK0 1009 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 A0A1W2PQH9 124 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 LRIG2O94898 1065 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 RPLP2P05387 115 aaKnown RBP13.97□□□□□ -0.17
VMP1-201ENST00000262291 CA4P22748 312 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 FAAP100Q0VG06 881 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 FAM171A1Q5VUB5 890 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 NUGGCQ68CJ6 796 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 ZNF567Q8N184 647 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 ZNF570Q96NI8 536 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 GPR62Q9BZJ7 368 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 SMYD2Q9NRG4 433 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 OSER1Q9NX31 292 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 UBP1Q9NZI7 540 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 DSEQ9UL01 958 aa13.97□□□□□ -0.17
VMP1-201ENST00000262291 SHROOM3Q8TF72 1996 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms