RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 KBTBD2Q8IY47 623 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 TERB1Q8NA31 727 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 IL31RAQ8NI17 732 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 SEPT1Q8WYJ6 367 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 TMEM176AQ96HP8 235 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 RUBCNLQ9H714 662 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 ZNF395Q9H8N7 513 aaPredicted RBP16.59■□□□□ 0.25
SREBF1-201ENST00000261646 CCDC159P0C7I6 412 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 GRIA3P42263 894 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 PLK1P53350 603 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 MTTPP55157 894 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 LAMC2Q13753 1193 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 AMHR2Q16671 573 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 IMPG1Q17R60 797 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 ZNF618Q5T7W0 954 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 FRA10AC1Q70Z53 315 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 CHSY1Q86X52 802 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 HTR3CQ8WXA8 447 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 EBNA1BP2Q99848 306 aaKnown RBP16.59■□□□□ 0.25
SREBF1-201ENST00000261646 COPG2Q9UBF2 871 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 VANGL2Q9ULK5 521 aa16.59■□□□□ 0.25
SREBF1-201ENST00000261646 GOLGA8CPA6NN73 597 aa16.58■□□□□ 0.25
SREBF1-201ENST00000261646 DLG1Q12959 904 aa16.58■□□□□ 0.25
SREBF1-201ENST00000261646 DPY19L2Q6NUT2 758 aa16.58■□□□□ 0.25
SREBF1-201ENST00000261646 OR5B17Q8NGF7 314 aa16.58■□□□□ 0.25
SREBF1-201ENST00000261646 SLC7A14Q8TBB6 771 aa16.58■□□□□ 0.25
SREBF1-201ENST00000261646 LPAR1Q92633 364 aa16.58■□□□□ 0.25
SREBF1-201ENST00000261646 TSPAN17Q96FV3 270 aa16.58■□□□□ 0.25
SREBF1-201ENST00000261646 SSU72Q9NP77 194 aaKnown RBP16.58■□□□□ 0.25
SREBF1-201ENST00000261646 ITGA11Q9UKX5 1188 aa16.58■□□□□ 0.25
SREBF1-201ENST00000261646 LRRC37A3O60309 1634 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 ADGRA2Q96PE1 1338 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 MMP8P22894 467 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 PIK3R1P27986 724 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 ETFBP38117 255 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 NR1D2Q14995 579 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 RBBP7Q16576 425 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 CMC1Q7Z7K0 106 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 SLCO2A1Q92959 643 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 SPATA33Q96N06 139 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 HOXC10Q9NYD6 342 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 KAT6AQ92794 2004 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 KDM4FA0A1W2PPD8 638 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 SPDYE2BA6NHP3 402 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 HDAC3O15379 428 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 ARHGEF9O43307 516 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 SPDYE6P0CI01 402 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 GABRB2P47870 512 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 PSME3P61289 254 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 TSTA3Q13630 321 aaPredicted RBP16.58■□□□□ 0.24
SREBF1-201ENST00000261646 NFYCQ13952 458 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 TRIM60Q495X7 471 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 FAM182AQ5T1J6 154 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 CCDC117Q8IWD4 279 aaPredicted RBP16.58■□□□□ 0.24
SREBF1-201ENST00000261646 JOSD2Q8TAC2 188 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 FAM136AQ96C01 138 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 ULK4Q96C45 1275 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 BTBD9Q96Q07 612 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 MMP19Q99542 508 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 ZNF180Q9UJW8 692 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 SNCAIPQ9Y6H5 919 aa16.58■□□□□ 0.24
SREBF1-201ENST00000261646 MYO1GB0I1T2 1018 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 PTGES3LE9PB15 166 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 AP3B1O00203 1094 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 SNHG28P0DPA3 235 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 BAG6P46379 1132 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 RAP1GDS1P52306 607 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 DALRD3Q5D0E6 543 aaKnown RBP16.57■□□□□ 0.24
SREBF1-201ENST00000261646 SAMD4BQ5PRF9 694 aaKnown RBP16.57■□□□□ 0.24
SREBF1-201ENST00000261646 GRTP1Q5TC63 336 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 AGAP9Q5VTM2 703 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 CHADLQ6NUI6 762 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 ADCY4Q8NFM4 1077 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 C7orf43Q8WVR3 580 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 GPRASP2Q96D09 838 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 IFT43Q96FT9 208 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 FAR2Q96K12 515 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 MTG1Q9BT17 334 aaPredicted RBP16.57■□□□□ 0.24
SREBF1-201ENST00000261646 ZNRF3Q9ULT6 936 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 ATP8B3O60423 1300 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 IQCA1LA6NCM1 817 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 M0QYT0 321 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 ITGB5P18084 799 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 RXRBP28702 533 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 CYP51A1Q16850 503 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 CAMK1DQ8IU85 385 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 SCUBE3Q8IX30 993 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 COG4Q9H9E3 785 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 ACSS2Q9NR19 701 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 PNPLA3Q9NST1 481 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.57■□□□□ 0.245e-8■■■□□ 18.9
SREBF1-201ENST00000261646 VTI1BQ9UEU0 232 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 RGPD5Q99666 1765 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 BAIAP3O94812 1187 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 IL18RAPO95256 599 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 JCHAINP01591 159 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 PGAM1P18669 254 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 HOXD13P35453 343 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 CDKN2BP42772 138 aa16.57■□□□□ 0.24
SREBF1-201ENST00000261646 TUBP50607 506 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms