RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 NUCKS1Q9H1E3 243 aaKnown RBP19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 MTG2Q9H4K7 406 aa19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 SLC32A1Q9H598 525 aa19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 TJP2Q9UDY2 1190 aa19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 XPO7Q9UIA9 1087 aaKnown RBP19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 TLR6Q9Y2C9 796 aa19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 ASPMQ8IZT6 3477 aa19.74■□□□□ 0.75
TM6SF1-201ENST00000258909 BECN2A8MW95 431 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 CAPN9O14815 690 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 MED7O43513 233 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 OPHN1O60890 802 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 SYPP08247 313 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 GNSP15586 552 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 POLR2EP19388 210 aaKnown RBP19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 OXTRP30559 389 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 MPP7Q5T2T1 576 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 DCAF12L1Q5VU92 463 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 PIP4P1Q86T03 277 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 IRF2BP1Q8IU81 584 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 CARNMT1Q8N4J0 409 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 AZIN2Q96A70 460 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 SLC39A13Q96H72 371 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 NUP58Q9BVL2 599 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 SUSD2Q9UGT4 822 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 KNL1Q8NG31 2342 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 IRAK2O43187 625 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 DLDP09622 509 aaKnown RBP19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 ACADSBP45954 432 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 PITX1P78337 314 aaPredicted RBP19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 TAF5Q15542 800 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 MMS22LQ6ZRQ5 1243 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 HJURPQ8NCD3 748 aaPredicted RBP19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 CADM4Q8NFZ8 388 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 DNASE2BQ8WZ79 361 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 LHX5Q9H2C1 402 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 PRSS16Q9NQE7 514 aa19.73■□□□□ 0.75
TM6SF1-201ENST00000258909 IGF2RP11717 2491 aa19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 METTL12A8MUP2 240 aa19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 SART1O43290 800 aaKnown RBP19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 IGLV3-19P01714 112 aa19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 ATP5BP06576 529 aaKnown RBP19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 ACSL1P33121 698 aa19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 FAM193AP78312 1265 aa19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 GRIK2Q13002 908 aa19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 ZC3H12AQ5D1E8 599 aaKnown RBP19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 FSCBQ5H9T9 825 aa19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 MS4A13Q5J8X5 152 aa19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 GBP6Q6ZN66 633 aa19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 ENOSF1Q7L5Y1 443 aa19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 PASD1Q8IV76 773 aa19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 FIBINQ8TAL6 211 aa19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 STK32AQ8WU08 396 aa19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 LMLNQ96KR4 655 aa19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 EIF2B4Q9UI10 523 aaKnown RBP19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 AJAP1Q9UKB5 411 aaPredicted RBP19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 INTS6Q9UL03 887 aaKnown RBP19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 WASF3Q9UPY6 502 aa19.72■□□□□ 0.75
TM6SF1-201ENST00000258909 SPEGQ15772 3267 aa19.71■□□□□ 0.75
TM6SF1-201ENST00000258909 CD59P13987 128 aa19.71■□□□□ 0.75
TM6SF1-201ENST00000258909 CSKP41240 450 aa19.71■□□□□ 0.75
TM6SF1-201ENST00000258909 NUMBP49757 651 aa19.71■□□□□ 0.75
TM6SF1-201ENST00000258909 RPS14P62263 151 aaKnown RBP19.71■□□□□ 0.75
TM6SF1-201ENST00000258909 SIM1P81133 766 aaPredicted RBP19.71■□□□□ 0.75
TM6SF1-201ENST00000258909 PDCLQ13371 301 aa19.71■□□□□ 0.75
TM6SF1-201ENST00000258909 DCAF6Q58WW2 860 aa19.71■□□□□ 0.75
TM6SF1-201ENST00000258909 RAP1GAP2Q684P5 730 aa19.71■□□□□ 0.75
TM6SF1-201ENST00000258909 TMEM110Q86TL2 294 aa19.71■□□□□ 0.75
TM6SF1-201ENST00000258909 CAMK1GQ96NX5 476 aa19.71■□□□□ 0.75
TM6SF1-201ENST00000258909 DDX50Q9BQ39 737 aaKnown RBP19.71■□□□□ 0.75
TM6SF1-201ENST00000258909 C6orf106Q9H6K1 298 aaPredicted RBP19.71■□□□□ 0.75
TM6SF1-201ENST00000258909 POPDC2Q9HBU9 364 aa19.71■□□□□ 0.75
TM6SF1-201ENST00000258909 APEX2Q9UBZ4 518 aa19.71■□□□□ 0.75
TM6SF1-201ENST00000258909 SLCO1B1Q9Y6L6 691 aa19.71■□□□□ 0.75
TM6SF1-201ENST00000258909 A0A1B0GTW7 788 aa19.7■□□□□ 0.74
TM6SF1-201ENST00000258909 TYW5A2RUC4 315 aaKnown RBP19.7■□□□□ 0.74
TM6SF1-201ENST00000258909 C1QTNF9BB2RNN3 333 aa19.7■□□□□ 0.74
TM6SF1-201ENST00000258909 TRUB2O95900 331 aaKnown RBP19.7■□□□□ 0.74
TM6SF1-201ENST00000258909 C1QTNF9P0C862 333 aa19.7■□□□□ 0.74
TM6SF1-201ENST00000258909 PON1P27169 355 aa19.7■□□□□ 0.74
TM6SF1-201ENST00000258909 MTIF2P46199 727 aaKnown RBP19.7■□□□□ 0.74
TM6SF1-201ENST00000258909 YWHAZP63104 245 aaKnown RBP19.7■□□□□ 0.74
TM6SF1-201ENST00000258909 NNTQ13423 1086 aa19.7■□□□□ 0.74
TM6SF1-201ENST00000258909 CDH18Q13634 790 aa19.7■□□□□ 0.74
TM6SF1-201ENST00000258909 EXOC3L4Q17RC7 722 aa19.7■□□□□ 0.74
TM6SF1-201ENST00000258909 LGI2Q8N0V4 545 aa19.7■□□□□ 0.74
TM6SF1-201ENST00000258909 WDTC1Q8N5D0 677 aa19.7■□□□□ 0.74
TM6SF1-201ENST00000258909 SNX19Q92543 992 aa19.7■□□□□ 0.74
TM6SF1-201ENST00000258909 MYO19Q96H55 970 aa19.7■□□□□ 0.74
TM6SF1-201ENST00000258909 IRX2Q9BZI1 471 aaPredicted RBP19.7■□□□□ 0.74
TM6SF1-201ENST00000258909 DNAAF2Q9NVR5 837 aaKnown RBP19.7■□□□□ 0.74
TM6SF1-201ENST00000258909 CFAP47Q6ZTR5 3102 aa19.69■□□□□ 0.74
TM6SF1-201ENST00000258909 SYNJ2BP-COX16A0A087WUM0 186 aa19.69■□□□□ 0.74
TM6SF1-201ENST00000258909 UPK3BL1B0FP48 263 aa19.69■□□□□ 0.74
TM6SF1-201ENST00000258909 UPK3BL2E5RIL1 263 aa19.69■□□□□ 0.74
TM6SF1-201ENST00000258909 SH3BP5O60239 455 aa19.69■□□□□ 0.74
TM6SF1-201ENST00000258909 GJB3O75712 270 aa19.69■□□□□ 0.74
TM6SF1-201ENST00000258909 APOEP02649 317 aa19.69■□□□□ 0.74
TM6SF1-201ENST00000258909 CTSOP43234 321 aaPredicted RBP19.69■□□□□ 0.74
TM6SF1-201ENST00000258909 MEA1Q16626 185 aa19.69■□□□□ 0.74
TM6SF1-201ENST00000258909 BEND5Q7L4P6 421 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms