RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 ATXN7O15265 892 aaPredicted RBP14.38□□□□□ -0.11
DDX39A-201ENST00000242776 PCDHGA12O60330 932 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 ASS1P00966 412 aaKnown RBP14.38□□□□□ -0.11
DDX39A-201ENST00000242776 ITGAVP06756 1048 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 PLA2G2AP14555 144 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 ABCB4P21439 1286 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 HOXD9P28356 352 aaPredicted RBP14.38□□□□□ -0.11
DDX39A-201ENST00000242776 HLA-FP30511 346 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 HNF1BP35680 557 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 PSEN1P49768 467 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 YWHAGP61981 247 aaKnown RBP eCLIP14.38□□□□□ -0.11
DDX39A-201ENST00000242776 CLDN10P78369 228 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 INAVAQ3KP66 663 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 DPCR1Q3MIW9 517 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 HES3Q5TGS1 186 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 ZNF605Q86T29 641 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 ZC3H3Q8IXZ2 948 aaKnown RBP14.38□□□□□ -0.11
DDX39A-201ENST00000242776 DHTKD1Q96HY7 919 aaPredicted RBP14.38□□□□□ -0.11
DDX39A-201ENST00000242776 HEXIM2Q96MH2 286 aaKnown RBP14.38□□□□□ -0.11
DDX39A-201ENST00000242776 TSG101Q99816 390 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 DUSP16Q9BY84 665 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 ACE2Q9BYF1 805 aaPredicted RBP14.38□□□□□ -0.11
DDX39A-201ENST00000242776 PCED1AQ9H1Q7 454 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 TMEM245Q9H330 911 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 AASDHPPTQ9NRN7 309 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 CLIC5Q9NZA1 410 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 ASH1LQ9NR48 2969 aaKnown RBP14.38□□□□□ -0.11
DDX39A-201ENST00000242776 RRP8O43159 456 aaKnown RBP14.38□□□□□ -0.11
DDX39A-201ENST00000242776 TIMM44O43615 452 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 CALUO43852 315 aaPredicted RBP14.38□□□□□ -0.11
DDX39A-201ENST00000242776 RFPL3O75679 317 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 TRIM49P0CI25 452 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 TRIM49CP0CI26 452 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 BMP6P22004 513 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 GCLMP48507 274 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 SGSHP51688 502 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 ZNF445P59923 1031 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 CCDC173Q0VFZ6 552 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 PAK1Q13153 545 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 TTC31Q49AM3 519 aaPredicted RBP14.38□□□□□ -0.11
DDX39A-201ENST00000242776 MPPE1Q53F39 396 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 KIAA0895LQ68EN5 471 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 KLHL10Q6JEL2 608 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 FMNL3Q8IVF7 1028 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 CPXM2Q8N436 756 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 GOLGA5Q8TBA6 731 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 CDK5RAP1Q96SZ6 601 aaKnown RBP14.38□□□□□ -0.11
DDX39A-201ENST00000242776 FUCA2Q9BTY2 467 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 SLC2A11Q9BYW1 496 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 PNPLA8Q9NP80 782 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 CGNQ9P2M7 1197 aaKnown RBP14.38□□□□□ -0.11
DDX39A-201ENST00000242776 SFMBT1Q9UHJ3 866 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 GGA2Q9UJY4 613 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 CTNND2Q9UQB3 1225 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 MAPK8IP1Q9UQF2 711 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 USP3Q9Y6I4 520 aa14.38□□□□□ -0.11
DDX39A-201ENST00000242776 PTPRQQ9UMZ3 2332 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 A0A1B0GTQ1 180 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 PYCARD-AS1I3L0S3 204 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 KALRNO60229 2985 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 NR3C1P04150 777 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 WNT1P04628 370 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 IGHV4-34P06331 123 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 INCA1Q0VD86 236 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 E2F5Q15329 346 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 ANO6Q4KMQ2 910 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 C1orf220Q5T0J3 134 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 MBLAC2Q68D91 279 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 ADIPOR2Q86V24 386 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 ZNF843Q8N446 348 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 WFDC5Q8TCV5 224 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 TAS1R2Q8TE23 839 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 NELFBQ8WX92 580 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 EDEM1Q92611 657 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 TAF4BQ92750 862 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 NAF1Q96HR8 494 aaKnown RBP14.37□□□□□ -0.11
DDX39A-201ENST00000242776 ELF4Q99607 663 aaPredicted RBP14.37□□□□□ -0.11
DDX39A-201ENST00000242776 ORAI3Q9BRQ5 295 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 IMPG2Q9BZV3 1241 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 TSPY26PQ9H489 355 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 OSGEPQ9NPF4 335 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 SERGEFQ9UGK8 458 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 NCKAP1Q9Y2A7 1128 aa14.37□□□□□ -0.11
DDX39A-201ENST00000242776 COL5A1P20908 1838 aaPredicted RBP14.36□□□□□ -0.11
DDX39A-201ENST00000242776 A0A1W2PP55 124 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 PPP1R3GB7ZBB8 358 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 PDXKO00764 312 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 WNT9AO14904 365 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 MSI1O43347 362 aaKnown RBP14.36□□□□□ -0.11
DDX39A-201ENST00000242776 PABPC1P11940 636 aaKnown RBP14.36□□□□□ -0.11
DDX39A-201ENST00000242776 ERCC5P28715 1186 aaPredicted RBP14.36□□□□□ -0.11
DDX39A-201ENST00000242776 CD70P32970 193 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 HARS2P49590 506 aaKnown RBP14.36□□□□□ -0.11
DDX39A-201ENST00000242776 NUMBP49757 651 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 TKTL1P51854 596 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 CXADRP78310 365 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 LRRC63Q05C16 580 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 SHBQ15464 509 aa14.36□□□□□ -0.11
DDX39A-201ENST00000242776 ZNF776Q68DI1 518 aaPredicted RBP14.36□□□□□ -0.11
DDX39A-201ENST00000242776 RFWD3Q6PCD5 774 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms