RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 JUNBP17275 347 aaPredicted RBP8.27□□□□□ -1.08
CXCR4-201ENST00000241393 TBXAS1P24557 533 aaPredicted RBP8.27□□□□□ -1.08
CXCR4-201ENST00000241393 NAMPTP43490 491 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 MMP13P45452 471 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 LIG4P49917 911 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 AP3M2P53677 418 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 CALCOCO2Q13137 446 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 ZNF568Q3ZCX4 644 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 TNFAIP8L3Q5GJ75 292 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 ERMARDQ5T6L9 678 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 LIN9Q5TKA1 542 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 SWSAP1Q6NVH7 229 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 FKBP9P1Q75LS8 142 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 MILR1Q7Z6M3 343 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.27□□□□□ -1.08
CXCR4-201ENST00000241393 APOBEC3FQ8IUX4 373 aaKnown RBP8.27□□□□□ -1.08
CXCR4-201ENST00000241393 CCDC60Q8IWA6 550 aaPredicted RBP8.27□□□□□ -1.08
CXCR4-201ENST00000241393 DNERQ8NFT8 737 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 CYFIP2Q96F07 1278 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 TSPAN17Q96FV3 270 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 BICD1Q96G01 975 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 FNBP1Q96RU3 617 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 SH2D3AQ9BRG2 576 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 FAM213AQ9BRX8 229 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 POLR3FQ9H1D9 316 aaPredicted RBP8.27□□□□□ -1.08
CXCR4-201ENST00000241393 PORCNQ9H237 461 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 CCDC134Q9H6E4 229 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 DHX33Q9H6R0 707 aaKnown RBP8.27□□□□□ -1.08
CXCR4-201ENST00000241393 ACTR5Q9H9F9 607 aaPredicted RBP8.27□□□□□ -1.08
CXCR4-201ENST00000241393 MRPL47Q9HD33 250 aaKnown RBP8.27□□□□□ -1.08
CXCR4-201ENST00000241393 TOPORSQ9NS56 1045 aaPredicted RBP8.27□□□□□ -1.08
CXCR4-201ENST00000241393 TMEM51Q9NW97 253 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 THG1LQ9NWX6 298 aaKnown RBP8.27□□□□□ -1.08
CXCR4-201ENST00000241393 CYP39A1Q9NYL5 469 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 BCCIPQ9P287 314 aaKnown RBP eCLIP8.27□□□□□ -1.08
CXCR4-201ENST00000241393 ANAPC7Q9UJX3 599 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 RIPK3Q9Y572 518 aa8.27□□□□□ -1.08
CXCR4-201ENST00000241393 WDR81Q562E7 1941 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 LOC285556D6RIA3 1793 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 NUDT19A8MXV4 375 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 RGS16O15492 202 aaPredicted RBP8.27□□□□□ -1.09
CXCR4-201ENST00000241393 RIPK2O43353 540 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 CAND2O75155 1236 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 PROSCO94903 275 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 GAS8O95995 478 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 HLA-DRAP01903 254 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 DLATP10515 647 aaKnown RBP8.27□□□□□ -1.09
CXCR4-201ENST00000241393 ATP5DP30049 168 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 COPB2P35606 906 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 ARL2P36404 184 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 NSFP46459 744 aaKnown RBP8.27□□□□□ -1.09
CXCR4-201ENST00000241393 SEC24CP53992 1094 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 GRM1Q13255 1194 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 PTK6Q13882 451 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 STAT4Q14765 748 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 EMC2Q15006 297 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 ATP13A4Q4VNC1 1196 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 AADACL2Q6P093 401 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 ZC3H14Q6PJT7 736 aaKnown RBP8.27□□□□□ -1.09
CXCR4-201ENST00000241393 CATSPERGQ6ZRH7 1159 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 CBLL1Q75N03 491 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 MON1BQ7L1V2 547 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 PHF13Q86YI8 300 aaPredicted RBP8.27□□□□□ -1.09
CXCR4-201ENST00000241393 BBOF1Q8ND07 529 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 CHST13Q8NET6 341 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 RAPGEF5Q92565 580 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 XPO6Q96QU8 1125 aaKnown RBP8.27□□□□□ -1.09
CXCR4-201ENST00000241393 SMURF1Q9HCE7 757 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 A1CFQ9NQ94 594 aaKnown RBP8.27□□□□□ -1.09
CXCR4-201ENST00000241393 HOXC10Q9NYD6 342 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 ASH2LQ9UBL3 628 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 HACL1Q9UJ83 578 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 AGO2Q9UKV8 859 aaKnown RBP8.27□□□□□ -1.09
CXCR4-201ENST00000241393 PPP2R3BQ9Y5P8 575 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 SCINQ9Y6U3 715 aa8.27□□□□□ -1.09
CXCR4-201ENST00000241393 IGKV6D-21A0A0A0MT36 114 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 ZC3H12DA2A288 527 aaKnown RBP8.26□□□□□ -1.09
CXCR4-201ENST00000241393 GPR39O43194 453 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 TCEA3O75764 348 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 KRT37O76014 449 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 CYP17A1P05093 508 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 ACO1P21399 889 aaKnown RBP8.26□□□□□ -1.09
CXCR4-201ENST00000241393 PIK3CAP42336 1068 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 POLGP54098 1239 aaPredicted RBP8.26□□□□□ -1.09
CXCR4-201ENST00000241393 EPHA5P54756 1037 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 CUL2Q13617 745 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 SLC29A2Q14542 456 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 KIR3DS1Q14943 382 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 TMEM132BQ14DG7 1078 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 PPP1R7Q15435 360 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 STXBP2Q15833 593 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 GKAP1Q5VSY0 366 aaPredicted RBP8.26□□□□□ -1.09
CXCR4-201ENST00000241393 RHBDF2Q6PJF5 856 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 MPZL3Q6UWV2 235 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 TAOK1Q7L7X3 1001 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 ZZZ3Q8IYH5 903 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 ABRAQ8N0Z2 381 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 NXPE1Q8N323 547 aa8.26□□□□□ -1.09
CXCR4-201ENST00000241393 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.26□□□□□ -1.09
CXCR4-201ENST00000241393 CHMP6Q96FZ7 201 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms