RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 PREBQ9HCU5 417 aa15.93■□□□□ 0.14
DDX55-201ENST00000238146 MTMR10Q9NXD2 777 aa15.93■□□□□ 0.14
DDX55-201ENST00000238146 TSPAN16Q9UKR8 245 aa15.93■□□□□ 0.14
DDX55-201ENST00000238146 LZTS1Q9Y250 596 aa15.93■□□□□ 0.14
DDX55-201ENST00000238146 AFG3L2Q9Y4W6 797 aa15.93■□□□□ 0.14
DDX55-201ENST00000238146 E2F8A0AVK6 867 aa15.93■□□□□ 0.14
DDX55-201ENST00000238146 FARP2O94887 1054 aaPredicted RBP15.93■□□□□ 0.14
DDX55-201ENST00000238146 ZNF781Q8N8C0 355 aa15.93■□□□□ 0.14
DDX55-201ENST00000238146 MAPK15Q8TD08 544 aa15.93■□□□□ 0.14
DDX55-201ENST00000238146 ARNTL2Q8WYA1 636 aa15.93■□□□□ 0.14
DDX55-201ENST00000238146 KHSRPQ92945 711 aaKnown RBP eCLIP15.93■□□□□ 0.142e-6■■■■□ 20.7
DDX55-201ENST00000238146 LENG1Q96BZ8 264 aaPredicted RBP15.93■□□□□ 0.14
DDX55-201ENST00000238146 DNAJC1Q96KC8 554 aaKnown RBP15.93■□□□□ 0.14
DDX55-201ENST00000238146 TEX13BQ9BXU2 312 aa15.93■□□□□ 0.14
DDX55-201ENST00000238146 STK39Q9UEW8 545 aa15.93■□□□□ 0.14
DDX55-201ENST00000238146 PCDHB12Q9Y5F1 795 aa15.93■□□□□ 0.14
DDX55-201ENST00000238146 CPA3P15088 417 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 HMGB2P26583 209 aaKnown RBP15.92■□□□□ 0.14
DDX55-201ENST00000238146 TYK2P29597 1187 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 SDC4P31431 198 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 HDAC4P56524 1084 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 MXD4Q14582 209 aaPredicted RBP15.92■□□□□ 0.14
DDX55-201ENST00000238146 CNGA3Q16281 694 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 NADK2Q4G0N4 442 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 MEX3CQ5U5Q3 659 aaKnown RBP15.92■□□□□ 0.14
DDX55-201ENST00000238146 LCLAT1Q6UWP7 414 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 AGBL3Q8NEM8 1001 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 QKIQ96PU8 341 aaKnown RBP eCLIP15.92■□□□□ 0.14
DDX55-201ENST00000238146 CDT1Q9H211 546 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 CYP3A43Q9HB55 503 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 LMCD1Q9NZU5 365 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 ANK1P16157 1881 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 ACKR2O00590 384 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 MLNP12872 115 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 TCF7P36402 384 aaPredicted RBP15.92■□□□□ 0.14
DDX55-201ENST00000238146 NDST1P52848 882 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 SESN2P58004 480 aaPredicted RBP15.92■□□□□ 0.14
DDX55-201ENST00000238146 USP46P62068 366 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 HEATR6Q6AI08 1181 aaKnown RBP15.92■□□□□ 0.14
DDX55-201ENST00000238146 KLHDC10Q6PID8 442 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 OLFML1Q6UWY5 402 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 B3GNT6Q6ZMB0 384 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 TNS4Q8IZW8 715 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 CDH19Q9H159 772 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 GALNT8Q9NY28 637 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 CDY2AQ9Y6F7 541 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 CDY1Q9Y6F8 540 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 RLFQ13129 1914 aa15.92■□□□□ 0.14
DDX55-201ENST00000238146 LACTBL1A8MY62 500 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 INO80B-WBP1J3KQ70 363 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 IL18RAPO95256 599 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 CRTAMO95727 393 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 GJB1P08034 283 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 TFE3P19532 575 aaPredicted RBP15.91■□□□□ 0.14
DDX55-201ENST00000238146 MX2P20592 715 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 MGAT1P26572 445 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 TMEM132AQ24JP5 1023 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 JADE1Q6IE81 842 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 NAPRTQ6XQN6 538 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 CMC1Q7Z7K0 106 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 C12orf29Q8N999 325 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 INO80BQ9C086 356 aaPredicted RBP15.91■□□□□ 0.14
DDX55-201ENST00000238146 RBM38Q9H0Z9 239 aaKnown RBP15.91■□□□□ 0.14
DDX55-201ENST00000238146 TRPC5Q9UL62 973 aaPredicted RBP15.91■□□□□ 0.14
DDX55-201ENST00000238146 RAB26Q9ULW5 256 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 AIM2O14862 343 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 IRF6O14896 467 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 TMCC1O94876 653 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 HSPA1LP34931 641 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 HMGCS2P54868 508 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 GK3PQ14409 553 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 FAM160B1Q5W0V3 765 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 PMF1Q6P1K2 205 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 OR52B2Q96RD2 323 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 C2orf40Q9H1Z8 148 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 FZD8Q9H461 694 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 Q9H521 79 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 MORF4L1Q9UBU8 362 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 BARX2Q9UMQ3 279 aaPredicted RBP15.91■□□□□ 0.14
DDX55-201ENST00000238146 AP4B1Q9Y6B7 739 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 ZNF487B1APH4 448 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 PGAM1P18669 254 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 GLDCP23378 1020 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 SERPINB5P36952 375 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 NR2C2P49116 596 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 NUMBP49757 651 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 NUDT2P50583 147 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 MYBPC1Q00872 1141 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 METTL21CQ5VZV1 264 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 LRRC8BQ6P9F7 803 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 KRT27Q7Z3Y8 459 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 SCUBE3Q8IX30 993 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 PLD6Q8N2A8 252 aaKnown RBP15.91■□□□□ 0.14
DDX55-201ENST00000238146 ZFP28Q8NHY6 868 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 ITFG2Q969R8 447 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 DHX35Q9H5Z1 703 aaKnown RBP15.91■□□□□ 0.14
DDX55-201ENST00000238146 VRTNQ9H8Y1 702 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 MYOZ2Q9NPC6 264 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 DTLQ9NZJ0 730 aa15.91■□□□□ 0.14
DDX55-201ENST00000238146 HESX1Q9UBX0 185 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms