RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 TBXAS1P24557 533 aaPredicted RBP8.59□□□□□ -1.03
SPARC-201ENST00000231061 TNNC1P63316 161 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 COL9A2Q14055 689 aaPredicted RBP8.59□□□□□ -1.03
SPARC-201ENST00000231061 ERV3-1Q14264 604 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 RPS6KA1Q15418 735 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 NAB2Q15742 525 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 ZNF674Q2M3X9 581 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 CDKL4Q5MAI5 379 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 FOXB2Q5VYV0 432 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 RALGPS2Q86X27 583 aaPredicted RBP8.59□□□□□ -1.03
SPARC-201ENST00000231061 TRIM59Q8IWR1 403 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 RBM4BQ9BQ04 359 aaKnown RBP8.59□□□□□ -1.03
SPARC-201ENST00000231061 EDEM2Q9BV94 578 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 RBM4Q9BWF3 364 aaKnown RBP8.59□□□□□ -1.03
SPARC-201ENST00000231061 ZNF408Q9H9D4 720 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 SP110Q9HB58 689 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 ARMCX3Q9UH62 379 aaPredicted RBP8.59□□□□□ -1.03
SPARC-201ENST00000231061 CDV3Q9UKY7 258 aaKnown RBP8.59□□□□□ -1.03
SPARC-201ENST00000231061 RRN3P2A6NIE6 340 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 MED24O75448 989 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 CALB1P05937 261 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 FAM153BP0C7A2 387 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 SLC9A1P19634 815 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 CRABP2P29373 138 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 GSSP48637 474 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 STAT2P52630 851 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 ALDH18A1P54886 795 aaKnown RBP8.59□□□□□ -1.03
SPARC-201ENST00000231061 NAA20P61599 178 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 KRT76Q01546 638 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 DSC2Q02487 901 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 GRM3Q14832 879 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 CNPY1Q3B7I2 92 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 FAM153CQ494X1 144 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 ALS2CLQ60I27 953 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 SMYD5Q6GMV2 418 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 ZNF572Q7Z3I7 529 aaPredicted RBP8.59□□□□□ -1.03
SPARC-201ENST00000231061 SFR1Q86XK3 245 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 CCNJLQ8IV13 435 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 ARHGAP24Q8N264 748 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 CPA6Q8N4T0 437 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 SYTL5Q8TDW5 730 aaPredicted RBP8.59□□□□□ -1.03
SPARC-201ENST00000231061 PHF21AQ96BD5 680 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 SLC22A18Q96BI1 424 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 GCOM2Q9BZD3 368 aaPredicted RBP8.59□□□□□ -1.03
SPARC-201ENST00000231061 ZC3H12CQ9C0D7 883 aaKnown RBP8.59□□□□□ -1.03
SPARC-201ENST00000231061 POLE3Q9NRF9 147 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 DNAJB4Q9UDY4 337 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 PCDHB12Q9Y5F1 795 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 DDX60LQ5H9U9 1706 aaKnown RBP8.59□□□□□ -1.03
SPARC-201ENST00000231061 NRAPQ86VF7 1730 aa8.59□□□□□ -1.03
SPARC-201ENST00000231061 MYH10P35580 1976 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 DCLK1O15075 740 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 SCAMP2O15127 329 aaKnown RBP8.58□□□□□ -1.04
SPARC-201ENST00000231061 NUPL2O15504 423 aaKnown RBP8.58□□□□□ -1.04
SPARC-201ENST00000231061 GABBR2O75899 941 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 SNHG28P0DPA3 235 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 PF4V1P10720 104 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 MSH2P43246 934 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 ITKQ08881 620 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 AP3B2Q13367 1082 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 NNTQ13423 1086 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 RAPSNQ13702 412 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 GLE1Q53GS7 698 aaKnown RBP8.58□□□□□ -1.04
SPARC-201ENST00000231061 TTMPQ5BVD1 217 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 IGF2-ASQ6U949 168 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 ZYG11AQ6WRX3 759 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 ZNF677Q86XU0 584 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 SCFD2Q8WU76 684 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 PTCD2Q8WV60 388 aaKnown RBP8.58□□□□□ -1.04
SPARC-201ENST00000231061 TUBGCP3Q96CW5 907 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 ASH2LQ9UBL3 628 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 SCOCQ9UIL1 159 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 VPS28Q9UK41 221 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 SLC39A10Q9ULF5 831 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 GPR34Q9UPC5 381 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 M0R3H8 397 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 LILRB5O75023 590 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 KRT1P04264 644 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 SHMT1P34896 483 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 HSPA13P48723 471 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 CASP5P51878 434 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 SLC26A5P58743 744 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 KCNJ2P63252 427 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 GABPAQ06546 454 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 LSAMPQ13449 338 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 LPIN1Q14693 890 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 KCTD19Q17RG1 926 aaPredicted RBP8.58□□□□□ -1.04
SPARC-201ENST00000231061 C6orf163Q5TEZ5 329 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 LHFPL2Q6ZUX7 228 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 CDH26Q8IXH8 852 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 LNX2Q8N448 690 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 FAIMQ9NVQ4 179 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 RNF14Q9UBS8 474 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 GPR52Q9Y2T5 361 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 STARD13Q9Y3M8 1113 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 GRID2IPA4D2P6 1211 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 CLIC2O15247 247 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 CLOCKO15516 846 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 GCNT3O95395 438 aa8.58□□□□□ -1.04
SPARC-201ENST00000231061 TBX18O95935 607 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms