RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 BCAR1P56945 870 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 SLC25A3Q00325 362 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 UBAP2LQ14157 1087 aaKnown RBP9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 MXD4Q14582 209 aaPredicted RBP9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 SURF1Q15526 300 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 HSP90AA5PQ58FG0 334 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 C16orf46Q6P387 395 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 NUDCD3Q8IVD9 361 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 SCUBE3Q8IX30 993 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 KLRG1Q96E93 195 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 CPB2Q96IY4 423 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 LPIN3Q9BQK8 851 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 CNPY3Q9BT09 278 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 B3GNT5Q9BYG0 378 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 CXCL16Q9H2A7 254 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 FZD8Q9H461 694 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 HSFX1Q9UBD0 423 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 PPP1R1BQ9UD71 204 aaPredicted RBP9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 TSPAN16Q9UKR8 245 aa9.68□□□□□ -0.86
HLA-DOA-201ENST00000229829 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 C15orf38-AP3S2A0A0A6YYH1 394 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 KRT37O76014 449 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 ZBED1O96006 694 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 STAG3L1P0CL83 205 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 TSHRP16473 764 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 ADORA2AP29274 412 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 PMLP29590 882 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 NDST1P52848 882 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 CRADDP78560 199 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 SLC10A2Q12908 348 aaPredicted RBP9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 KLHDC10Q6PID8 442 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 METTL7BQ6UX53 244 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 ZNF534Q76KX8 674 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 ARPINQ7Z6K5 226 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 NDUFAF2Q8N183 169 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 TUBGCP4Q9UGJ1 667 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 BPTFQ12830 3046 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 IGKV6-21A0A0C4DH24 114 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 PRR5-ARHGAP8B1AHC4 643 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 I3L4J1 428 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 NFKBIEO00221 500 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 LYPLA1O75608 230 aaPredicted RBP9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 APOEP02649 317 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 PFKMP08237 780 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 ARHGAP8P85298 464 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 GBE1Q04446 702 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 MBTD1Q05BQ5 628 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 NADK2Q4G0N4 442 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 TMEM259Q4ZIN3 620 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 TEX44Q53QW1 395 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 EFCAB12Q6NXP0 572 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 PMF1Q6P1K2 205 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 TMEM53Q6P2H8 277 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 KLHL35Q6PF15 583 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 ATG14Q6ZNE5 492 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 ADGRF2Q8IZF7 708 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 DGCR14Q96DF8 476 aaKnown RBP9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 PANX3Q96QZ0 392 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 GPR20Q99678 358 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 CORO1BQ9BR76 489 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 TUBB6Q9BUF5 446 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 PCDH18Q9HCL0 1135 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 PNPLA8Q9NP80 782 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 PAK5Q9P286 719 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 MFHAS1Q9Y4C4 1052 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 CEP350Q5VT06 3117 aa9.67□□□□□ -0.86
HLA-DOA-201ENST00000229829 KLF11O14901 512 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 VCLP18206 1134 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 PRKCHP24723 683 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 TBL3Q12788 808 aaKnown RBP9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 TFDP2Q14188 446 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 PATL1Q86TB9 770 aaKnown RBP9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 LRRC43Q8N309 656 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 FAM172AQ8WUF8 416 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 SIGLEC10Q96LC7 697 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 PGLYRP2Q96PD5 576 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 SNRNP25Q9BV90 132 aaKnown RBP9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 RNF19AQ9NV58 838 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 KCNK4Q9NYG8 393 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 SIRPGQ9P1W8 387 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 NOP56O00567 594 aaKnown RBP9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 ITM2AO43736 263 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 EDNRBP24530 442 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 MSX2P35548 267 aaPredicted RBP9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 CNGA3Q16281 694 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 SLC10A6Q3KNW5 377 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 CCDC80Q76M96 950 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 C14orf80Q86SX3 495 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 STKLD1Q8NE28 680 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 CHST13Q8NET6 341 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 C17orf50Q8WW18 174 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 KHSRPQ92945 711 aaKnown RBP eCLIP9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 HPDLQ96IR7 371 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 NDEL1Q9GZM8 345 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 IL1RAPL1Q9NZN1 696 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 PLA2G4CQ9UP65 541 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 APOL1O14791 398 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 SPAG6O75602 509 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 GABBR2O75899 941 aa9.66□□□□□ -0.86
HLA-DOA-201ENST00000229829 SORBS2O94875 1100 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms