RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 SLC12A4Q9UP95 1085 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 EP400Q96L91 3159 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 GP5P40197 560 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 NR2C2P49116 596 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 CPT1AP50416 773 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 PGLYRP2Q96PD5 576 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 SLC38A7Q9NVC3 462 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 LAMB2P55268 1798 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 MFSD11O43934 449 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 KLHL2O95198 593 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 VAPBO95292 243 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 NPR3P17342 541 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 ZNF618Q5T7W0 954 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 NAPEPLDQ6IQ20 393 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 CTU1Q7Z7A3 348 aaKnown RBP13.94□□□□□ -0.18
RAB3D-201ENST00000222120 PPTC7Q8NI37 304 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 WNT8BQ93098 351 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 ATP6V1E2Q96A05 226 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 IFT43Q96FT9 208 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 THAP1Q9NVV9 213 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 SYBUQ9NX95 663 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 SNX10Q9Y5X0 201 aa13.94□□□□□ -0.18
RAB3D-201ENST00000222120 A0A0G2JLL6 359 aaPredicted RBP13.93□□□□□ -0.18
RAB3D-201ENST00000222120 TRDMT1O14717 391 aaKnown RBP13.93□□□□□ -0.18
RAB3D-201ENST00000222120 SMPD1P17405 629 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 PSEN2P49810 448 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 PLK1P53350 603 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 SOWAHAQ2M3V2 549 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 KIAA1841Q6NSI8 718 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 PRRT2Q7Z6L0 340 aaPredicted RBP13.93□□□□□ -0.18
RAB3D-201ENST00000222120 PPHLN1Q8NEY8 458 aaKnown RBP13.93□□□□□ -0.18
RAB3D-201ENST00000222120 CCDC97Q96F63 343 aaPredicted RBP13.93□□□□□ -0.18
RAB3D-201ENST00000222120 KCTD15Q96SI1 283 aaPredicted RBP13.93□□□□□ -0.18
RAB3D-201ENST00000222120 ARHGEF38Q9NXL2 777 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 OR12D3Q9UGF7 316 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 TAGLN3Q9UI15 199 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 MFHAS1Q9Y4C4 1052 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 BTBD19C9JJ37 291 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 PGK1P00558 417 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 PROCP04070 461 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 CSH1P0DML2 217 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 CSH2P0DML3 217 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 NOS2P35228 1153 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 PTDSS1P48651 473 aaKnown RBP13.93□□□□□ -0.18
RAB3D-201ENST00000222120 ARHGAP1Q07960 439 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 OLIG2Q13516 323 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 CCDC142Q17RM4 750 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 UNC93AQ86WB7 457 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 DEFB107AQ8IZN7 70 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 FICDQ9BVA6 458 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 POPDC2Q9HBU9 364 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 EPS15L1Q9UBC2 864 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 CDY2AQ9Y6F7 541 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 CDY1Q9Y6F8 540 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 GOLGA4Q13439 2230 aaKnown RBP13.93□□□□□ -0.18
RAB3D-201ENST00000222120 LTBP4Q8N2S1 1624 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 MATKP42679 507 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 TPD52P55327 224 aaPredicted RBP13.93□□□□□ -0.18
RAB3D-201ENST00000222120 USP4Q13107 963 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 NT5DC4Q86YG4 428 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 ZDHHC17Q8IUH5 632 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 SKA2Q8WVK7 121 aaPredicted RBP13.93□□□□□ -0.18
RAB3D-201ENST00000222120 CMTM5Q96DZ9 223 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 NAT9Q9BTE0 207 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 KATNAL1Q9BW62 490 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 MCM8Q9UJA3 840 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 LTFP02788 710 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 KPNA2P52292 529 aaKnown RBP13.93□□□□□ -0.18
RAB3D-201ENST00000222120 ZNF132P52740 706 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 NBPF20Q3BBV1 942 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 KCNMB4Q86W47 210 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 GALNT4Q8N4A0 578 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 AZIN2Q96A70 460 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 RMDN1Q96DB5 314 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 ILKAPQ9H0C8 392 aaPredicted RBP13.93□□□□□ -0.18
RAB3D-201ENST00000222120 DENND2DQ9H6A0 471 aaPredicted RBP13.93□□□□□ -0.18
RAB3D-201ENST00000222120 CDHR5Q9HBB8 845 aa13.93□□□□□ -0.18
RAB3D-201ENST00000222120 RBM22Q9NW64 420 aaKnown RBP eCLIP13.93□□□□□ -0.18
RAB3D-201ENST00000222120 PRR5-ARHGAP8B1AHC4 643 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 ARHGAP8P85298 464 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 SH3D19Q5HYK7 790 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 NIPA2Q8N8Q9 360 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 BANPQ8N9N5 519 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 BHMTQ93088 406 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 CCDC134Q9H6E4 229 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 IL1RL2Q9HB29 575 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 ADGRA2Q96PE1 1338 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 TCEA3O75764 348 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 MMP3P08254 477 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 HDAC4P56524 1084 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 CERCAMQ5T4B2 595 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 IQSEC1Q6DN90 963 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 TMPRSS6Q8IU80 811 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 PYDC1Q8WXC3 89 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 INPP5DQ92835 1189 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 KCNK16Q96T55 309 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 FAM96AQ9H5X1 160 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 PNPOQ9NVS9 261 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 LRFN2Q9ULH4 789 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 NRCAMQ92823 1304 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms