RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 HACD1B0YJ81 288 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 EML1O00423 815 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 CAPN15O75808 1086 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 ZNF10P21506 573 aaPredicted RBP19.37■□□□□ 0.69
SMPD3-201ENST00000219334 PPM1AP35813 382 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 MAD2L1Q13257 205 aaPredicted RBP19.37■□□□□ 0.69
SMPD3-201ENST00000219334 ACAP1Q15027 740 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 FBXO39Q8N4B4 442 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 KIAA0895Q8NCT3 520 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 FAM120BQ96EK7 910 aaKnown RBP19.37■□□□□ 0.69
SMPD3-201ENST00000219334 NUDT5Q9UKK9 219 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 CHKAP35790 457 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 MMRN1Q13201 1228 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 DYNC1I2Q13409 638 aaKnown RBP19.37■□□□□ 0.69
SMPD3-201ENST00000219334 DAB2IPQ5VWQ8 1189 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 KCNMB4Q86W47 210 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 MDM1Q8TC05 714 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 MKL1Q969V6 931 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 DNMT3LQ9UJW3 386 aa19.37■□□□□ 0.69
SMPD3-201ENST00000219334 NR5A2O00482 541 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 CSH1P0DML2 217 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 CSH2P0DML3 217 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 PAX3P23760 479 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 MAGEC3Q8TD91 643 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 CXorf40AQ8TE69 158 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 TBL1YQ9BQ87 522 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 CDC42EP4Q9H3Q1 356 aaKnown RBP19.36■□□□□ 0.69
SMPD3-201ENST00000219334 NMRAL1Q9HBL8 299 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 HEY2Q9UBP5 337 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 USP41Q3LFD5 358 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 KIAA1324Q6UXG2 1013 aaKnown RBP19.36■□□□□ 0.69
SMPD3-201ENST00000219334 TRAPPC5Q8IUR0 188 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 DPY30Q9C005 99 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 CCT8L1PA6NM43 557 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 KCNK1O00180 336 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 ZBTB14O43829 449 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 ZNF682O95780 498 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 CCDC159P0C7I6 412 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 GP5P40197 560 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 TBL3Q12788 808 aaKnown RBP19.36■□□□□ 0.69
SMPD3-201ENST00000219334 CAAP1Q9H8G2 361 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 SHOC2Q9UQ13 582 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 TNFSF13BQ9Y275 285 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 CCDC85CA6NKD9 419 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 E5RJQ4 531 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 ZNF23P17027 643 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 POU1F1P28069 291 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 PEX5P50542 639 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 CYP2A13Q16696 494 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 NKX2-3Q8TAU0 364 aa19.36■□□□□ 0.69
SMPD3-201ENST00000219334 CAB39Q9Y376 341 aaPredicted RBP19.36■□□□□ 0.69
SMPD3-201ENST00000219334 TYMPP19971 482 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 PMS1P54277 932 aaKnown RBP19.35■□□□□ 0.69
SMPD3-201ENST00000219334 GRTP1Q5TC63 336 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 CCDC81Q6ZN84 652 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 KIAA0319LQ8IZA0 1049 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 PCDHA3Q9Y5H8 950 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 GJC2Q5T442 439 aaPredicted RBP19.35■□□□□ 0.69
SMPD3-201ENST00000219334 PDPK2PQ6A1A2 396 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 ZNF470Q6ECI4 717 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 WDR18Q9BV38 432 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 GAKO14976 1311 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 KATNA1O75449 491 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 PGAM1P18669 254 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 CRABP2P29373 138 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 CYP2C18P33260 490 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 NOS2P35228 1153 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 SKIV2L2P42285 1042 aaKnown RBP19.35■□□□□ 0.69
SMPD3-201ENST00000219334 CASP7P55210 303 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 SNRPD1P62314 119 aaKnown RBP19.35■□□□□ 0.69
SMPD3-201ENST00000219334 KIF2BQ8N4N8 673 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 RIN3Q8TB24 985 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 WNT8BQ93098 351 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 ARHGAP20Q9P2F6 1191 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 STK39Q9UEW8 545 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 COL5A2P05997 1499 aaPredicted RBP19.35■□□□□ 0.69
SMPD3-201ENST00000219334 PIK3CDO00329 1044 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 PSEN1P49768 467 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 BMPR2Q13873 1038 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 INSCQ1MX18 579 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 HELQQ8TDG4 1101 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 C1QTNF3-AMACRE9PGA6 284 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 VAPBO95292 243 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 GNRH1P01148 92 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 GRK4P32298 578 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 TRIP4Q15650 581 aaPredicted RBP19.35■□□□□ 0.69
SMPD3-201ENST00000219334 SPANXN3Q5MJ09 141 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 TDRD5Q8NAT2 981 aaKnown RBP19.35■□□□□ 0.69
SMPD3-201ENST00000219334 FBXO25Q8TCJ0 367 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 PHF21BQ96EK2 531 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 CDH9Q9ULB4 789 aa19.35■□□□□ 0.69
SMPD3-201ENST00000219334 FGF10O15520 208 aaPredicted RBP19.34■□□□□ 0.69
SMPD3-201ENST00000219334 SERPINA13PQ6UXR4 307 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 SLC35C1Q96A29 364 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 TLL1O43897 1013 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 SERPINI2O75830 405 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 FYNP06241 537 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 CLTBP09497 229 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 SEC24CP53992 1094 aa19.34■□□□□ 0.69
SMPD3-201ENST00000219334 C15orf52Q6ZUT6 534 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms