RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 MAPRE3Q9UPY8 281 aa14.92□□□□□ -0.02
SPTLC2-201ENST00000216484 ANKARQ7Z5J8 1434 aa14.92□□□□□ -0.02
SPTLC2-201ENST00000216484 ULK1O75385 1050 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 TTLL6Q8N841 843 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 TIPINQ9BVW5 301 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 ATF5Q9Y2D1 282 aaPredicted RBP14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 ZNF335Q9H4Z2 1342 aaPredicted RBP14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 MYO5CQ9NQX4 1742 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 WRBO00258 174 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 ATP6V1G2O95670 118 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 GEMP55040 296 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 SKP1P63208 163 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 RFX4Q33E94 735 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 RBM43Q6ZSC3 357 aaKnown RBP14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 LY9Q9HBG7 655 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 TCF7L2Q9NQB0 619 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 VPS45Q9NRW7 570 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 NPY2RP49146 381 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 LSM3P62310 102 aaKnown RBP14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 INO80DQ53TQ3 878 aaPredicted RBP14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 ATF7IP2Q5U623 682 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 NOTUMQ6P988 496 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 MLXQ9UH92 298 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 COG5Q9UP83 839 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 R3HDM2Q9Y2K5 976 aaKnown RBP14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 PRKAB1Q9Y478 270 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 TRIM64A6NGJ6 449 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 SEC24AO95486 1093 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 CYP2E1P05181 493 aaPredicted RBP14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 CKBP12277 381 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 RAG1P15918 1043 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 KLK7P49862 253 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 RPL19P84098 196 aaKnown RBP14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 CXXC5Q7LFL8 322 aaKnown RBP14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 ADHFE1Q8IWW8 467 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 BPIFB6Q8NFQ5 453 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 MAGEE2Q8TD90 523 aaPredicted RBP14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 AIFM2Q9BRQ8 373 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 NT5MQ9NPB1 228 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 MROH7Q68CQ1 1323 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 TCEA2Q15560 299 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 MKNK1Q9BUB5 465 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 XPR1Q9UBH6 696 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 RBP1P09455 135 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 HIPK1Q86Z02 1210 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 ZNF483Q8TF39 744 aaPredicted RBP14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 CCDC177Q9NQR7 707 aaPredicted RBP14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 SH3D21A4FU49 640 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 SCNN1BP51168 640 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 PPP2R2BQ00005 443 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 POU6F1Q14863 301 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 ATP13A5Q4VNC0 1218 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 FBXO36Q8NEA4 188 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 SLC38A2Q96QD8 506 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 ETAA1Q9NY74 926 aa14.91□□□□□ -0.02
SPTLC2-201ENST00000216484 PDXKO00764 312 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 CNTFP26441 200 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 RPL4P36578 427 aaKnown RBP14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 FAM126BQ8IXS8 530 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 FBXO32Q969P5 355 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 GPR108Q9NPR9 543 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 UBP1Q9NZI7 540 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 VPS51Q9UID3 782 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 KLF15Q9UIH9 416 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 PCDHB2Q9Y5E7 798 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 LAMC1P11047 1609 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 ATXN2Q99700 1313 aaKnown RBP14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 EYA4O95677 639 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 GJA1P17302 382 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 CIPCQ9C0C6 399 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 RRN3Q9NYV6 651 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 TFECO14948 347 aaPredicted RBP14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 ITGB3P05106 788 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 SLFN11Q7Z7L1 901 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 CLHC1Q8NHS4 586 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 CLEC4AQ9UMR7 237 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 BGNP21810 368 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 MCAMP43121 646 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 POLD2P49005 469 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 VBP1P61758 197 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 GPAT3Q53EU6 434 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 EFCAB12Q6NXP0 572 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 MINDY2Q8NBR6 621 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 CCDC28BQ9BUN5 200 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 SHOC2Q9UQ13 582 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 FARP2O94887 1054 aaPredicted RBP14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 KCNH1O95259 989 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 EPORP19235 508 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 KCNA10Q16322 511 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 C5orf22Q49AR2 442 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 DCP1BQ8IZD4 617 aaKnown RBP14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 TTC29Q8NA56 475 aaPredicted RBP14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 VPS35Q96QK1 796 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 TMEM8AQ9HCN3 771 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 CRATP43155 626 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 SGCGQ13326 291 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 SPIDRQ14159 915 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 ARMC8Q8IUR7 673 aa14.9□□□□□ -0.02
SPTLC2-201ENST00000216484 APOL2Q9BQE5 337 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms