RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 DEFB106AQ8N104 65 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 ARMC7Q9H6L4 198 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 STK39Q9UEW8 545 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 VPS51Q9UID3 782 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 PCDHB12Q9Y5F1 795 aa13.86□□□□□ -0.19
SF3A1-201ENST00000215793 RTN3O95197 1032 aaPredicted RBP13.85□□□□□ -0.19
SF3A1-201ENST00000215793 VAPBO95292 243 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 CYP3A4P08684 503 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 MSH3P20585 1137 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 YWHAQP27348 245 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 MIPP30301 263 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 RXRGP48443 463 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 RAB14P61106 215 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 MSLNQ13421 630 aaPredicted RBP13.85□□□□□ -0.19
SF3A1-201ENST00000215793 STARD3Q14849 445 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 EARS2Q5JPH6 523 aaKnown RBP13.85□□□□□ -0.19
SF3A1-201ENST00000215793 MFSD4BQ5TF39 518 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 RIPOR1Q6ZS17 1223 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 DHFR2Q86XF0 187 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 CYP4Z2PQ8N1L4 340 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 MCOLN3Q8TDD5 553 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 ADAMTS13Q76LX8 1427 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 ZNF839A8K0R7 811 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 TPH1P17752 444 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 TALDO1P37837 337 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 PIK3CGP48736 1102 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 ALDH5A1P51649 535 aaPredicted RBP13.85□□□□□ -0.19
SF3A1-201ENST00000215793 CDK16Q00536 496 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 SCARA3Q6AZY7 606 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 WDR59Q6PJI9 974 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 KCNT2Q6UVM3 1135 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 CDK20Q8IZL9 346 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 DPP10Q8N608 796 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 DNAJB3Q8WWF6 145 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 CATSPER2Q96P56 530 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 TIMM13Q9Y5L4 95 aaPredicted RBP13.85□□□□□ -0.19
SF3A1-201ENST00000215793 SLIT1O75093 1534 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 BMP10O95393 424 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 MT-CO1P00395 513 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 ACAT1P24752 427 aaKnown RBP13.85□□□□□ -0.19
SF3A1-201ENST00000215793 TRIM71Q2Q1W2 868 aaKnown RBP13.85□□□□□ -0.19
SF3A1-201ENST00000215793 ZCCHC8Q6NZY4 707 aaKnown RBP13.85□□□□□ -0.19
SF3A1-201ENST00000215793 MTSS1LQ765P7 747 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 NECAB2Q7Z6G3 386 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 FAM126BQ8IXS8 530 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 ZCCHC9Q8N567 271 aaKnown RBP13.85□□□□□ -0.19
SF3A1-201ENST00000215793 ETNPPLQ8TBG4 499 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 METTL6Q8TCB7 284 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 PANX3Q96QZ0 392 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 TMEM79Q9BSE2 394 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 MRPS26Q9BYN8 205 aaKnown RBP13.85□□□□□ -0.19
SF3A1-201ENST00000215793 DNPEPQ9ULA0 475 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 KCNK1O00180 336 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 LDLRP01130 860 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 POMCP01189 267 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 YBX3P16989 372 aaKnown RBP eCLIP13.85□□□□□ -0.193e-7■■■□□ 18.6
SF3A1-201ENST00000215793 SLC34A1Q06495 639 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 FASTKQ14296 549 aaKnown RBP13.85□□□□□ -0.19
SF3A1-201ENST00000215793 SLC30A10Q6XR72 485 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 TFAP2DQ7Z6R9 452 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 DNAAF5Q86Y56 855 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 SCUBE3Q8IX30 993 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 FNDC5Q8NAU1 212 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 SLC2A14Q8TDB8 520 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 SH3GL2Q99962 352 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 SLC25A23Q9BV35 468 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 OSGEPL1Q9H4B0 414 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 GDF3Q9NR23 364 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 MAN1C1Q9NR34 630 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 TRPC4Q9UBN4 977 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 ADAM30Q9UKF2 790 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 NFASCO94856 1347 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 CEP152O94986 1710 aa13.85□□□□□ -0.19
SF3A1-201ENST00000215793 ZSCAN5CA6NGD5 496 aaPredicted RBP13.84□□□□□ -0.19
SF3A1-201ENST00000215793 AP5Z1O43299 807 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 ALADP13716 330 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 ME2P23368 584 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 PTPN3P26045 913 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 PRKCIP41743 596 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 FKBP1CQ5VVH2 108 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 AENQ8WTP8 325 aaKnown RBP13.84□□□□□ -0.19
SF3A1-201ENST00000215793 DNAJC18Q9H819 358 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 POPDC2Q9HBU9 364 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 SAR1AQ9NR31 198 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 SH3BP4Q9P0V3 963 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 PCDHGC5Q9Y5F6 944 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 SNCAIPQ9Y6H5 919 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 UMODL1Q5DID0 1318 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 CAMSAP1Q5T5Y3 1602 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 MRASO14807 208 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 ATP6V1G2O95670 118 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 MLH1P40692 756 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 IL5RAQ01344 420 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 C9orf131Q5VYM1 1079 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 SYTL1Q8IYJ3 562 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 EID3Q8N140 333 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 TMEM86AQ8N2M4 240 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 MAGED4Q96JG8 741 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 MID1IP1Q9NPA3 183 aa13.84□□□□□ -0.19
SF3A1-201ENST00000215793 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms