RNA–Protein interactions for RNA: ENSMUST00000205694.1

Rnf40-202, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf40, Length 5,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-202ENSMUST00000205694 FdxrQ61578 494 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Arl13bQ640N2 427 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 HpseQ6YGZ1 535 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Deup1Q7M6Y5 601 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Sgo2Q7TSY8 1164 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Tmem154Q8C4Q9 181 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Swi5Q8K3D3 89 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 MyripQ8K3I4 856 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 MtrexQ9CZU3 1040 aaKnown RBP13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Gm5114W4VSN8 858 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 CtcflA2APF3 636 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 G430095P16RikE9Q913 147 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Srpk1O70551 648 aaKnown RBP13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Tex24Q5DP50 351 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 StilQ60988 1262 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Wdr11Q8K1X1 1223 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Rpp40Q8R1F9 363 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Rnf8Q8VC56 488 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Trap1Q9CQN1 706 aaKnown RBP13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Ror1Q9Z139 937 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Ssxb9A2BI93 185 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Clec4fP70194 548 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Rnf113a2Q14B01 337 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Olfr23Q7TRX4 325 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Q80WR5 230 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Thap3Q8BJ25 218 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Catsper4Q8BVN3 442 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Fbxl13Q8CDU4 790 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Ssh3Q8K330 649 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Olfr866Q8VFI7 312 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Dpy30Q99LT0 99 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Pfdn1Q9CWM4 122 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Cul2Q9D4H8 745 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 CflarO35732 481 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Tpst1O70281 370 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 AvilO88398 819 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Rps7P62082 194 aaKnown RBP13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Gabpb1Q00420 383 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 E330034G19RikQ3UWX6 351 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Plk4Q64702 925 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 SvoplQ6PDF3 494 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Abcg2Q7TMS5 657 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Srrm3Q80WV7 648 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Mief1Q8BGV8 463 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Klhl36Q8R124 613 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Rhobtb2Q91V93 728 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Acot13Q9CQR4 140 aa13.57□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Slfn3A0A1L1STQ7 640 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Znf711A2ANX9 761 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Hoxc6P10629 235 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Sox6P40645 827 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Ly9Q01965 654 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Cyp2c65Q148B1 490 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Garnl3Q3V0G7 1038 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Smarcd1Q61466 515 aaKnown RBP13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Trim50Q810I2 483 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Spdye4bQ8CDE8 236 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Lztr1Q9CQ33 837 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Trim10Q9WUH5 489 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Tnrc6cQ3UHC0 1690 aaKnown RBP13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Vmn2r39L7N2E5 861 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 PtgisO35074 501 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 SarsP26638 512 aaKnown RBP13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Colec11Q3SXB8 272 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Fam131bQ3TY60 332 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Klra8Q60682 266 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 SyncripQ7TMK9 623 aaKnown RBP13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Abi3Q8BYZ1 367 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Trpv3Q8K424 791 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Aim2Q91VJ1 354 aaKnown RBP13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 DaglbQ91WC9 669 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 WwoxQ91WL8 414 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Sike1Q9CPR7 207 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Fam122aQ9DB52 284 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Rnf19bA2A7Q9 732 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 R3hdm1E9Q9Q2 1135 aaKnown RBP13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 AfpP02772 605 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 AmhP27106 555 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 FynP39688 537 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Ephb3P54754 993 aaKnown RBP13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Ptcd3Q14C51 685 aaKnown RBP13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Tmem247Q497K7 211 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Adam2Q60718 735 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Tcf4Q60722 670 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Stard3Q61542 446 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Rad9bQ6WBX7 403 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Tmc8Q7TN58 722 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Pcdh19Q80TF3 1145 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Fam111aQ9D2L9 613 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Tmem86aQ9D8N3 241 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Plod3Q9R0E1 741 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Apold1E9Q0X2 246 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Serpina3cP29621 417 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Usp39Q3TIX9 564 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Ttc9Q3V038 219 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Podnl1Q6P3Y9 559 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Btnl9Q8BJE2 536 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 Fam180aQ8BR21 173 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 PpatQ8CIH9 517 aa13.56□□□□□ -0.24
Rnf40-202ENSMUST00000205694 D630039A03RikQ8K0M7 236 aa13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 59.1 ms