RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Nomo1Q6GQT9 1214 aaKnown RBP28.6■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Rad9bQ6WBX7 403 aa28.6■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Best2Q8BGM5 508 aa28.6■■■□□ 2.17
Ldb1-208ENSMUST00000185355 ClmpQ8R373 373 aa28.6■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Dnajc3Q91YW3 504 aa28.6■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Timp4Q9JHB3 224 aa28.6■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Pex11bQ9Z210 259 aa28.6■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Slc10a3P21129 473 aa28.59■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Wnt3aP27467 352 aa28.59■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Acot8P58137 320 aa28.59■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Krt26Q3TRJ4 462 aa28.59■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Sema3cQ62181 751 aa28.59■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Wee2Q66JT0 555 aa28.59■■■□□ 2.17
Ldb1-208ENSMUST00000185355 PreplQ8C167 725 aa28.59■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Taf7lQ9D3R9 471 aa28.59■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Vmn2r25W4VSP2 855 aa28.59■■■□□ 2.17
Ldb1-208ENSMUST00000185355 4930426L09RikE9Q0N7 123 aa28.58■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Gm3138K7N754 218 aa28.58■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Crabp2P22935 138 aa28.58■■■□□ 2.17
Ldb1-208ENSMUST00000185355 MylpfP97457 169 aa28.58■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Ppp1r13lQ5I1X5 824 aa28.58■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Stk38lQ7TSE6 464 aa28.58■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Hao1Q9WU19 370 aa28.58■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Gm21293E9Q4G9 266 aa28.58■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Otol1Q4ZJM7 482 aa28.58■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Gpr65Q61038 337 aa28.58■■■□□ 2.17
Ldb1-208ENSMUST00000185355 DazlQ64368 298 aaKnown RBP28.58■■■□□ 2.17
Ldb1-208ENSMUST00000185355 RbfaQ6P3B9 350 aa28.58■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Thnsl1Q8BH55 747 aa28.58■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Atg16l1Q8C0J2 607 aa28.58■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Ago3Q8CJF9 860 aa28.58■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Arfip2Q8K221 341 aa28.58■■■□□ 2.17
Ldb1-208ENSMUST00000185355 AadacQ99PG0 398 aa28.58■■■□□ 2.17
Ldb1-208ENSMUST00000185355 Rnf19bA2A7Q9 732 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Gm6588E9Q3K0 461 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Pdzd7E9Q9W7 1021 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Gm3336J3QMQ6 198 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 OtulinQ3UCV8 352 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Elf1Q60775 612 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Phlda1Q62392 405 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Mef2dQ63943 514 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Nlgn2Q69ZK9 836 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 4921504E06RikQ8CET2 560 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Prrg2Q8R182 198 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Tbrg4Q91YM4 630 aaKnown RBP28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Gm43951A0A0N4SUT6 962 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Gml2G5E8L7 176 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 DldO08749 509 aaKnown RBP28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Cldn5O54942 218 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 PenkP22005 268 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Mc4rP56450 332 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Echdc2Q3TLP5 296 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Rnf168Q80XJ2 565 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Rps6kc1Q8BLK9 1056 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Tmtc3Q8BRH0 920 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Spdye4bQ8CDE8 236 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 HibchQ8QZS1 385 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Dedd2Q8QZV0 330 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Nudt8Q9CR24 210 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Tex9Q9D845 387 aa28.57■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Supt3B0QZW4 406 aa28.56■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Hsd17b7O88736 334 aa28.56■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Hrh2P97292 397 aa28.56■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Cd163Q2VLH6 1121 aa28.56■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Usp43Q8BUM9 1132 aa28.56■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Vmn1r203Q8R273 311 aa28.56■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Bag2Q91YN9 210 aa28.56■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Cttnbp2nlQ99LJ0 638 aa28.56■■■□□ 2.16
Ldb1-208ENSMUST00000185355 DesP31001 469 aaKnown RBP28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Hsdl2Q2TPA8 490 aaKnown RBP28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Tmem65Q4VAE3 234 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Il17reQ8BH06 637 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Pacs1Q8K212 961 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Olfr532Q8VGT4 309 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 GghQ9Z0L8 317 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Rtl9Q32KG4 1339 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Zmynd8A2A484 1235 aaKnown RBP28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Slfn8B1ARD8 910 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Gm12800B1AUV4 484 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Kpna7C0LLJ0 499 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Gm10717D3Z1I8 228 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Zfp651E9PZ11 729 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Zfr2E9Q5M4 874 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Gm12794L7MTS5 483 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Serpini1O35684 410 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 PctpP53808 214 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Slc20a1Q61609 681 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Acap2Q6ZQK5 770 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Abcg2Q7TMS5 657 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Trib2Q8K4K3 343 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Angel1Q8VCU0 667 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Homer3Q99JP6 356 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 HgsQ99LI8 775 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Dlgap1Q9D415 992 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Nme3Q9WV85 169 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 MycsQ9Z304 431 aa28.55■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Vps4bP46467 444 aaKnown RBP28.54■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Slc8a1P70414 970 aa28.54■■■□□ 2.16
Ldb1-208ENSMUST00000185355 FerP70451 823 aa28.54■■■□□ 2.16
Ldb1-208ENSMUST00000185355 Smpd1Q04519 627 aa28.54■■■□□ 2.16
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms