RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Tsga13Q9DA17 273 aa26.53■■□□□ 1.84
Tpm1-216ENSMUST00000113707 Rabgap1lA6H6A9 815 aa26.52■■□□□ 1.84
Tpm1-216ENSMUST00000113707 March10E9PX79 788 aa26.52■■□□□ 1.84
Tpm1-216ENSMUST00000113707 Spata31E9QAF0 1014 aa26.52■■□□□ 1.84
Tpm1-216ENSMUST00000113707 SftpbP50405 377 aa26.52■■□□□ 1.84
Tpm1-216ENSMUST00000113707 Arpp19P56212 112 aaKnown RBP26.52■■□□□ 1.84
Tpm1-216ENSMUST00000113707 Arhgap44Q5SSM3 814 aa26.52■■□□□ 1.84
Tpm1-216ENSMUST00000113707 Dmc1Q61880 340 aa26.52■■□□□ 1.84
Tpm1-216ENSMUST00000113707 Plk4Q64702 925 aa26.52■■□□□ 1.84
Tpm1-216ENSMUST00000113707 Barhl2Q8VIB5 384 aa26.52■■□□□ 1.84
Tpm1-216ENSMUST00000113707 Rin1Q921Q7 763 aa26.52■■□□□ 1.84
Tpm1-216ENSMUST00000113707 Cybrd1Q925G2 290 aa26.52■■□□□ 1.84
Tpm1-216ENSMUST00000113707 Plxna3P70208 1872 aa26.52■■□□□ 1.84
Tpm1-216ENSMUST00000113707 Rhox3fA2ANE1 215 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Ism1A2ATD1 454 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Gm5936A2BG95 728 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Gm5640A3KG49 728 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Gm8334F7CD45 553 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Anxa8O35640 327 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Cnga4Q3UW12 575 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 PvrQ8K094 408 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 ClmpQ8R373 373 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Wdr54Q9R0D8 334 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Baz2bA2AUY4 2123 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 SmgcF6VRN1 385 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Grem1O70326 184 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Prf1P10820 554 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Flt3lgP49772 232 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Gbp1Q01514 589 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Tex35Q14BK3 207 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Gpd1lQ3ULJ0 351 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Trim24Q64127 1051 aaKnown RBP26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Olfr1198Q7TR12 308 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Chn2Q80XD1 332 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 NfascQ810U3 1240 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Tmx4Q8C0L0 335 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Samd3Q8C4H2 520 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Q8C5S3 137 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Tas1r2Q925I4 843 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Sytl2Q99N50 950 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Mrps17Q9CQE3 120 aaKnown RBP26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 MceeQ9D1I5 178 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Tssk3Q9D2E1 268 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Noxred1Q9D3S5 366 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Q9D454 513 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Ddx21Q9JIK5 851 aaKnown RBP26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Rfwd2Q9R1A8 733 aaKnown RBP26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Smarcb1Q9Z0H3 385 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Mtmr7Q9Z2C9 660 aa26.51■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Zdbf2Q5SS00 2493 aaKnown RBP26.5■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Pbx3O35317 434 aa26.5■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Hsd17b7O88736 334 aa26.5■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Trap1aP19473 224 aa26.5■■□□□ 1.83
Tpm1-216ENSMUST00000113707 ZfaP23607 742 aa26.5■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Mmp13P33435 472 aa26.5■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Lig3P97386 1015 aa26.5■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Cdk16Q04735 496 aa26.5■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Pyroxd1Q3TMV7 498 aa26.5■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Gcnt3Q5JCT0 437 aa26.5■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Tpp2Q64514 1262 aa26.5■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Vwa2Q70UZ7 791 aa26.5■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Nup54Q8BTS4 510 aaKnown RBP26.5■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Ints9Q8K114 658 aaKnown RBP26.5■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Rpl34Q9D1R9 117 aaKnown RBP26.5■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Capn10Q9ESK3 666 aa26.5■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Cwc15Q9JHS9 229 aaKnown RBP26.5■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Fam171a2A2A699 822 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Olfr1022L7MTT3 315 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Kifc3O35231 824 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Ifnar2O35664 513 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Ap1g2O88512 791 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Zfy1P10925 782 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Gabpb1Q00420 383 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Creb1Q01147 341 aaKnown RBP26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Gbp8Q2V6D6 525 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Alkbh5Q3TSG4 395 aaKnown RBP26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Upf3aQ3ULJ3 422 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Xkr5Q5GH66 676 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Msi1Q61474 362 aaKnown RBP26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 4933402J07RikQ8BHX0 270 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Zmym6Q8BS54 1249 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Afap1l1Q8BZI0 768 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Ndufab1Q9CR21 156 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Ccdc83Q9D4V3 305 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Padi3Q9Z184 664 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Gm29133A0A1B0GT72 266 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Olfr271-ps1A0A1L1SQH2 283 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Hes2O54792 157 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 PigrO70570 771 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Usp46P62069 366 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Tmem120bQ3TA38 339 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Prkaa1Q5EG47 559 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Grm6Q5NCH9 871 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Sp140Q6NSQ5 534 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Parp6Q6P6P7 630 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Stambpl1Q76N33 436 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 MroQ7TNB4 248 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 ToporsQ80Z37 1033 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Igsf8Q8R366 611 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Oser1Q9D722 291 aa26.49■■□□□ 1.83
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms