RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Fam129cD3YZB0 591 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Afg1lQ3V384 480 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Psd4Q8BLR5 1005 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Zfp398Q8BV16 643 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Ropn1Q9ESG2 212 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 RttnQ8R4Y8 2226 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Slc39a2G3X943 309 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Tnfaip8l3Q3TBL6 204 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Nat9Q3UG98 241 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Mief2Q5NCS9 454 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Stap2Q8R0L1 411 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Stard7Q8R1R3 373 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Gm3095E9Q058 166 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 PcnaP17918 261 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Cpa5Q8R4H4 436 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 AasdhpptQ9CQF6 309 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Grin2dQ03391 1323 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Setd4P58467 439 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Leng8Q8CBY3 785 aaKnown RBP18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Slc30a5Q8R4H9 761 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Dhx36Q8VHK9 1001 aaKnown RBP18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Bcl2l12Q9D3J3 255 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Smpd3Q9JJY3 655 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Slc9a3G3X939 829 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Sun2Q8BJS4 731 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Pcdha10Q91Y20 946 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Riok2Q9CQS5 547 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Dcaf6Q9DC22 876 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Gm42688A0A0R3P9D1 673 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 MaffO54791 156 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 TecP24604 630 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Aco1P28271 889 aaKnown RBP18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Ldoc1Q7TPY9 151 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Doc2gQ9ESN1 387 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Gm7945F6QI24 236 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Rrm1P07742 792 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Pitrm1Q8K411 1036 aaKnown RBP18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Mto1Q923Z3 669 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Cntd1Q9D995 334 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Pdzd9Q9D9M4 266 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Plod3Q9R0E1 741 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Ncoa3O09000 1398 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 TpteG5E8H5 664 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 PigrO70570 771 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Cyp2e1Q05421 493 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Prr33Q8C494 260 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Fam126bQ8C729 530 aa18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Tbrg4Q91YM4 630 aaKnown RBP18.76■□□□□ 0.59
Trim71-201ENSMUST00000111816 Lrrc38A2VDH3 298 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Cyp3a57D3YYZ0 503 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Vmn2r87E9PZX4 848 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 CntfP51642 198 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Gpatch4Q3TFK5 415 aaKnown RBP18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Rbm20Q3UQS8 1199 aaKnown RBP18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Slitrk1Q810C1 696 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 PdxkQ8K183 312 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 LactbQ9EP89 551 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Uhrf1bp1lA2RSJ4 1457 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Kcnk1O08581 336 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Dhx15O35286 795 aaKnown RBP18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Cd180Q62192 661 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Tmem117Q8BH18 514 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Pus7lQ8CE46 702 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Mterf3Q8R3J4 412 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 SphkapQ6NSW3 1687 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Nr6a1Q64249 495 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Sntg2Q925E0 539 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Trim2Q9ESN6 744 aaKnown RBP18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Galk1Q9R0N0 392 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Ccdc74aE9Q9U8 364 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Tmc8Q7TN58 722 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Dmrtc1Q9D9R7 182 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Nfe2Q07279 373 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Kiaa0319Q5SZV5 1081 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Soat1Q61263 540 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 AslQ91YI0 464 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Znf639Q99KZ6 485 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Lrrc69Q9D9Q0 347 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Taf6lQ8R2K4 616 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Htra1Q9R118 480 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Carmil3Q3UFQ8 1375 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Slc28a2O88627 660 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Hhla1Q3TYV2 514 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Gm5592Q3V0A6 857 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Pum1Q80U78 1189 aaKnown RBP18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Dppa5aQ9CQS7 118 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Akap8lQ9R0L7 642 aaKnown RBP18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Usp19Q3UJD6 1360 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Zmym2Q9CU65 1376 aa18.75■□□□□ 0.59
Trim71-201ENSMUST00000111816 Krt28A6BLY7 462 aa18.74■□□□□ 0.59
Trim71-201ENSMUST00000111816 Zfp384E9Q1A5 584 aaKnown RBP18.74■□□□□ 0.59
Trim71-201ENSMUST00000111816 Prdm15E9Q8T2 1174 aa18.74■□□□□ 0.59
Trim71-201ENSMUST00000111816 Matn2O08746 956 aa18.74■□□□□ 0.59
Trim71-201ENSMUST00000111816 Usp27Q8CEG8 438 aa18.74■□□□□ 0.59
Trim71-201ENSMUST00000111816 Add2Q9QYB8 725 aa18.74■□□□□ 0.59
Trim71-201ENSMUST00000111816 Vwa5b1A9Z1V5 1215 aa18.74■□□□□ 0.59
Trim71-201ENSMUST00000111816 Gm3642K7N6V4 267 aa18.74■□□□□ 0.59
Trim71-201ENSMUST00000111816 Nfatc2ipO09130 412 aa18.74■□□□□ 0.59
Trim71-201ENSMUST00000111816 Epn2Q8CHU3 595 aa18.74■□□□□ 0.59
Trim71-201ENSMUST00000111816 Prl8a6Q9DAY2 240 aa18.74■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms