RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 SbdsP70122 250 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 SpertQ32MG2 446 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 PomkQ3TUA9 349 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Gm13103Q4VAD2 491 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Itga3Q62470 1053 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Tfdp2Q64163 446 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Ccdc25Q78PG9 208 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 RalylQ8BTF8 293 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Ddx1Q91VR5 740 aaKnown RBP23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Mtmr7Q9Z2C9 660 aa23.6■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Skint6A7XUZ6 1240 aa23.59■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Lonrf1D3YY23 762 aa23.59■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Eftud2O08810 971 aaKnown RBP23.59■■□□□ 1.37
Upf3a-201ENSMUST00000043767 VcpQ01853 806 aaKnown RBP23.59■■□□□ 1.37
Upf3a-201ENSMUST00000043767 H2-Q2Q4KN81 360 aa23.59■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Vps41Q5KU39 853 aa23.59■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Hspbap1Q8BK58 483 aa23.59■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Trpa1Q8BLA8 1125 aa23.59■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Lrch3Q8BVU0 778 aa23.59■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Q8CDN1 933 aa23.59■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Pkn3Q8K045 878 aa23.59■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Champ1Q8K327 802 aaKnown RBP23.59■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Rnf112Q96DY5 654 aa23.59■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Slc39a5Q9D856 535 aa23.59■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Tmem174Q9DCX7 243 aa23.59■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Net1Q9Z206 595 aa23.59■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Dcpp3L7N259 170 aa23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 KlO35082 1014 aa23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 LgmnO89017 435 aa23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 PrnpP04925 254 aa23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Krt8P11679 490 aaKnown RBP23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 GsrP47791 500 aa23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Dynlt1P51807 113 aa23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Lig3P97386 1015 aa23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Tex35Q14BK3 207 aa23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Ccdc92bQ5SUE3 299 aa23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Tshz2Q68FE9 1030 aa23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Kif11Q6P9P6 1052 aa23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 AmphQ7TQF7 686 aa23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 HhatQ8BMT9 499 aa23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Iffo1Q8BXL9 562 aa23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Olfr711Q9EPG2 314 aa23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Dgcr8Q9EQM6 773 aa23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 PnkpQ9JLV6 522 aaKnown RBP23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Diaph3Q9Z207 1171 aa23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Plxna3P70208 1872 aa23.58■■□□□ 1.37
Upf3a-201ENSMUST00000043767 Cer1O55233 272 aa23.58■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Zfy2P20662 777 aa23.58■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Olfr867Q7TRF3 331 aa23.58■■□□□ 1.36
Upf3a-201ENSMUST00000043767 RbakQ8BQC8 711 aa23.58■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Btbd9Q8C726 612 aa23.58■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Tceal5Q8CCT4 200 aa23.58■■□□□ 1.36
Upf3a-201ENSMUST00000043767 TrabdQ99JY4 376 aa23.58■■□□□ 1.36
Upf3a-201ENSMUST00000043767 MlxiplQ99MZ3 864 aa23.58■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Themis3Q9CU24 569 aa23.58■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Xpo7Q9EPK7 1087 aa23.58■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Apol8A2VDH7 339 aaKnown RBP23.57■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Man2b1O09159 1013 aa23.57■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Casq2O09161 415 aa23.57■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Resp18P47939 175 aa23.57■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Eif3eP60229 445 aaKnown RBP23.57■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Stmn4P63042 189 aa23.57■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Gas6Q61592 674 aa23.57■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Olfr1057Q7TR75 315 aa23.57■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Vtcn1Q7TSP5 283 aa23.57■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Usp1Q8BJQ2 784 aa23.57■■□□□ 1.36
Upf3a-201ENSMUST00000043767 FsbpQ8BKE5 299 aa23.57■■□□□ 1.36
Upf3a-201ENSMUST00000043767 L3mbtl3Q8BLB7 883 aa23.57■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Prpsap2Q8R574 369 aa23.57■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Syap1Q9D5V6 365 aa23.57■■□□□ 1.36
Upf3a-201ENSMUST00000043767 IkbipQ9DBZ1 373 aa23.57■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Slc2a5Q9WV38 501 aa23.57■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Plxna4Q80UG2 1893 aa23.57■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Iqcj-Schip1A0A088MLT8 559 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Schip1P0DPB4 484 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Hoxd13P70217 339 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Pdcd1Q02242 288 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Ctnnb1Q02248 781 aaKnown RBP23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Sdr16c6Q05A13 316 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Bpifb5Q3UQ05 490 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Nr2c1Q505F1 590 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Krt12Q64291 487 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Uts2bQ765I1 113 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Casd1Q7TN73 797 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Trim62Q80V85 475 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Wdr59Q8C0M0 992 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Nek8Q91ZR4 698 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Cog8Q9JJA2 640 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Ecel1Q9JMI0 775 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Patl2A2ARM1 529 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 C7D3YXF5 845 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Yme1l1O88967 715 aaKnown RBP23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Arl4aP61213 200 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Gm10488Q4KL05 212 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Phactr4Q501J7 694 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Sec23ipQ6NZC7 998 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Olfr1353Q8VGU8 309 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Akr1a1Q9JII6 325 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Pex11bQ9Z210 259 aa23.56■■□□□ 1.36
Upf3a-201ENSMUST00000043767 Gm382B1AXN3 1250 aa23.55■■□□□ 1.36
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms