RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 0610012G03RikA0A0J9YTR2 95 aa10.54□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Ncam2O35136 837 aa10.54□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Epha3P29319 983 aa10.54□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Akt1P31750 480 aa10.54□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Pih1d3Q3KNI6 218 aa10.54□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Hddc2Q3SXD3 199 aa10.54□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Cep295nlQ497N6 533 aa10.54□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Bcar1Q61140 874 aa10.54□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Zfp943Q6NZP4 507 aa10.54□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Garem2Q6PAJ3 880 aa10.54□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 ZfatQ7TS63 1237 aa10.54□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tdp1Q8BJ37 609 aa10.54□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 GhdcQ99J23 532 aa10.54□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Rilpl2Q99LE1 197 aa10.54□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 CatsperzQ9CQP8 194 aa10.54□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Pard3bQ9CSB4 1203 aa10.54□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 PudpQ9D5U5 234 aa10.54□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Irx5Q9JKQ4 484 aa10.54□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Zfp990B1AVN5 605 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Sdc4O35988 198 aaKnown RBP10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Cyp2j6O54750 501 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 En2P09066 324 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Impdh2P24547 514 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Hsd17b2P51658 381 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Gdpd4Q3TT99 632 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Nat9Q3UG98 241 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Srek1ip1Q4V9W2 153 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Pcid2Q8BFV2 399 aaKnown RBP10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Q8CD60 292 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tdrd7Q8K1H1 1086 aaKnown RBP10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Utp6Q8VCY6 597 aaKnown RBP10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Pcdha1Q91Y21 948 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Atp6v1b1Q91YH6 513 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 NamptQ99KQ4 491 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Mov10l1Q99MV5 1187 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Pdpk1Q9Z2A0 559 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Lrrc73B2RWC4 316 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Olfr600E9PUN7 314 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Gm6205E9PZS2 359 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Gm7942L7N277 499 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Surf2P09926 257 aaKnown RBP10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Rpl7aP12970 266 aaKnown RBP10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 BtkP35991 659 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 CratP47934 626 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 TubP50586 505 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 MafbP54841 323 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Il6stQ00560 917 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Kcnk9Q3LS21 402 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Zmym5Q3U2E2 627 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 RhocQ62159 193 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Six2Q62232 296 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Glra2Q7TNC8 452 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Mib1Q80SY4 1006 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Rmnd5aQ80YQ8 391 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Gm6367Q8C6L9 287 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Castor2Q8CAB8 329 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Lars2Q8VDC0 902 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Q9D1F3 157 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 PtproE9Q612 1226 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Slc27a6E9Q9W4 619 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 F830016B08RikG3UWE2 416 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Vmn2r5K7N788 911 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 AvilO88398 819 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Pgk2P09041 417 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Lsp1P19973 330 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Ak8Q32M07 479 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Btg1-ps1Q3V0S2 161 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Btg1-ps2Q3V0X0 161 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Otub1Q7TQI3 271 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 ThtpaQ8JZL3 224 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Acvr1cQ8K348 493 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Sppl3Q9CUS9 384 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Zbed3Q9D0L1 228 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Atp5oQ9DB20 213 aaKnown RBP10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Cd151O35566 253 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Gsta3P30115 221 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Traf2P39429 501 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Serpind1P49182 478 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Tbc1d10bQ8BHL3 798 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Gjd4Q8BSD4 364 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Rccd1Q8BTU7 377 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Ugt3a2Q8JZZ0 523 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Sec14l2Q99J08 403 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Txndc12Q9CQU0 170 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Commd8Q9CZG3 183 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Kdelc1Q9JHP7 502 aa10.53□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 TprnA2AI08 749 aaKnown RBP10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Sdccag3A2AIW0 432 aa10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Cyp2t4E9PWV0 503 aa10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Sptlc1O35704 473 aa10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Serpinb2P12388 415 aa10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Ccnd1P25322 295 aa10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Cd68P31996 326 aa10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Cct8P42932 548 aa10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Gabrb2P63137 512 aa10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 AurkaP97477 395 aa10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 RalgdsQ03385 852 aa10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Q14AM7 275 aa10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Fscn1Q61553 493 aa10.52□□□□□ -0.72
Ccdc40-201ENSMUST00000035935 Krt72Q6IME9 520 aa10.52□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms