RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Entpd3Q8BFW6 529 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Cwf19l2Q8BG79 887 aaKnown RBP18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Dcaf6Q9DC22 876 aa18.88■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Abcb1bP06795 1276 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 UmpsP13439 481 aaKnown RBP18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 CblP22682 913 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Olfr1105Q7TR58 312 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Xylt1Q811B1 953 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Ankrd52Q8BTI7 1076 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Ephb1Q8CBF3 984 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Ndufaf1Q9CWX2 328 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Olfr600E9PUN7 314 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Pold2O35654 469 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Lamp1P11438 406 aaKnown RBP18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Pex2P55098 305 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Bop1P97452 732 aaKnown RBP18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Samd11Q1RNF8 542 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 C6.1alQ7M757 291 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Tyw3Q8BSA9 257 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 VcpkmtQ8C436 228 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Gga1Q8R0H9 635 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Ace2Q8R0I0 805 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Lypd3Q91YK8 363 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Traf7Q922B6 594 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Dclre1aQ9JIC3 1026 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Dnajb7Q9QYI8 312 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 St6galnac4Q9R2B6 360 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Tmem115Q9WUH1 350 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Osbpl8B9EJ86 889 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Pgk2P09041 417 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Cyp2a4P15392 494 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Cyp2a5P20852 494 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Il12aP43431 215 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Emilin3P59900 758 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 ArsiQ32KI9 573 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Hipk4Q3V016 616 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Srbd1Q497V5 1015 aaKnown RBP18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Tbx10Q810F8 385 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 BoraQ8BS90 525 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Plin5Q8BVZ1 463 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 ItchQ8C863 864 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Ero1bQ8R2E9 467 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Snx15Q91WE1 337 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Pcdha1Q91Y21 948 aa18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 GarsQ9CZD3 729 aaKnown RBP18.87■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Ank3G5E8K5 1961 aa18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Ttll11A4Q9F4 727 aa18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Zfp384E9Q1A5 584 aaKnown RBP18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Ptar1E9QAB6 424 aa18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 SmgcF6VRN1 385 aa18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Trdmt1O55055 415 aa18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Kcna3P16390 528 aa18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Atp9bP98195 1146 aa18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Slc20a1Q61609 681 aa18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Gemin4Q6P6L6 1058 aaKnown RBP18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Chmp2aQ9DB34 222 aa18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Ddx21Q9JIK5 851 aaKnown RBP18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Map3k14Q9WUL6 942 aa18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Exoc7O35250 697 aa18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 S100a5P63084 93 aa18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Map3k7Q62073 579 aa18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Ccdc63Q8CDV6 558 aa18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Dedd2Q8QZV0 330 aa18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Oit3Q8R4V5 546 aa18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Stk33Q924X7 491 aa18.86■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Pcdh15Q99PJ1 1943 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Krt90E9Q1Z0 538 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Olfr1354E9Q5G9 310 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Morf4l1P60762 362 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Fbp2P70695 339 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 RgnQ64374 299 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Ankrd6Q69ZU8 712 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Exoc3l4Q6DIA2 721 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Dnajc16Q80TN4 772 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Cgrrf1Q8BMJ7 332 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Sulf1Q8K007 870 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Tmprss4Q8VCA5 435 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Rem2Q8VEL9 341 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 AslQ91YI0 464 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Micu3Q9CTY5 523 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Serpina1fQ9DCQ7 411 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Krt7Q9DCV7 457 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Smok3cA0A087WSF2 504 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Arhgef37A1IGU4 676 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Zfp651E9PZ11 729 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Zfp946F6VWU8 523 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Mmp3P28862 477 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 PolgP54099 1218 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Dsc2P55292 902 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Fermt1P59113 677 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Meaf6Q2VPQ9 191 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Wee2Q66JT0 555 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Klhl38Q8BSF5 581 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Afap1l1Q8BZI0 768 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Wdr59Q8C0M0 992 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 GldcQ91W43 1025 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Plin3Q9DBG5 437 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Rmdn1Q9DCV4 305 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 PignQ9R1S3 931 aa18.85■□□□□ 0.61
Ccdc3-201ENSMUST00000027988 Bclaf3A2AG58 752 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms