RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Elk3P41971 409 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Mc4rP56450 332 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Tcf4Q60722 670 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 CybbQ61093 570 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Adprhl2Q8CG72 370 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Iqsec1Q8R0S2 961 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Slc35c2Q8VCX2 364 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Rprd1aQ8VDS4 312 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 CrygnQ8VHL5 183 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Subh2bvQ9D9Z7 123 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 PalmdQ9JHU2 551 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 XkQ9QXY7 446 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Zscan12Q9Z1D7 501 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Btbd19S4R1I0 287 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 FocadA2AKG8 1798 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Pate3B3GLJ3 98 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 SelenovD3YXG1 328 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ppp1r36D3Z0R2 411 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Kdelc2G5E897 503 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Capn6O35646 641 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Fgfr1P16092 822 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Mcpt4P21812 246 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 BtkP35991 659 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 YwhahP68510 246 aaKnown RBP11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Msx3P70354 204 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gm4981Q3ULJ8 291 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Arhgap1Q5FWK3 439 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Mbtd1Q6P5G3 631 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Q80WR5 230 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Aoc2Q812C9 757 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Bmp3Q8BHE5 468 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Pde10aQ8CA95 790 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Kdelr1Q99JH8 212 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Kbtbd12Q9D618 625 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Borcs5Q9D920 195 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 CenpkQ9ESN5 271 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Abca3Q8R420 1704 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Srsf11E9Q6E5 511 aaKnown RBP11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 E2f6O54917 272 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ythdf1P59326 559 aaKnown RBP11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Atp6v1b2P62814 511 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Kcnc2Q14B80 642 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Slc24a2Q14BI1 711 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 MyrfQ3UR85 1138 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Capn3Q64691 821 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 RfflQ6ZQM0 377 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Usp6nlQ80XC3 819 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Lrif1Q8CDD9 755 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Sh3kbp1Q8R550 709 aaKnown RBP11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Oas1dQ8VI95 361 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Znf24Q91VN1 368 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Pacsin3Q99JB8 424 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 MceeQ9D1I5 178 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Rsc1a1Q9ER99 582 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Cry2Q9R194 592 aa11.14□□□□□ -0.63
Msh3-201ENSMUST00000022220 Fam171a2A2A699 822 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Vmn2r100E9QAZ9 850 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Zfy2P20662 777 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Lmo2P25801 158 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Lsg1Q3UM18 644 aaKnown RBP11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ubtfl1Q3USZ2 394 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gm4952Q5FW57 296 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Slain1Q68FF7 579 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Pdk1Q8BFP9 434 aaKnown RBP11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Afap1l1Q8BZI0 768 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Mbtps2Q8CHX6 515 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Acvr1cQ8K348 493 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Oxct1Q9D0K2 520 aaKnown RBP11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Bmp15Q9Z0L4 392 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ttc30a2A2AKQ8 664 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Znf711A2ANX9 761 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Slfn9B1ARD6 910 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Gm8257E9Q8R3 264 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 OmdO35103 423 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 PpargP37238 505 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Ccr5P51682 354 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 EsrrgP62509 458 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Npas2P97460 816 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Mcm9Q2KHI9 1134 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 ZufspQ3T9Z9 577 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Mif4gdQ3UBZ5 222 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Stx3Q64704 289 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Arrdc3Q7TPQ9 414 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Olfr792Q7TRH9 311 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 BoraQ8BS90 525 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Dnali1Q8BVN8 258 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Dus1lQ8C2P3 475 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Rmnd1Q8CI78 450 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Mob2Q8VI63 235 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Dctn2Q99KJ8 402 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Kif12Q9D2Z8 642 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Prss23Q9D6X6 382 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Wfdc1Q9ESH5 211 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 M1apQ9Z0E1 529 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Kcnd2Q9Z0V2 630 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Slc6a21A0A1B0GSD2 748 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Odc1P00860 461 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 WapP01173 134 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Nat1P50294 290 aa11.13□□□□□ -0.63
Msh3-201ENSMUST00000022220 Epas1P97481 874 aa11.13□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms