RNA–Protein interactions for RNA: ENSMUST00000019649.3

Ubb-201, Transcript of Polyubiquitin-B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubb, Length 1,499 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubb-201ENSMUST00000019649 Taf3Q5HZG4 932 aa16.45■□□□□ 0.22
Ubb-201ENSMUST00000019649 Ddx3xQ62167 662 aaKnown RBP16.45■□□□□ 0.22
Ubb-201ENSMUST00000019649 Sec23ipQ6NZC7 998 aa16.45■□□□□ 0.22
Ubb-201ENSMUST00000019649 Pced1aQ6P1Z5 449 aa16.45■□□□□ 0.22
Ubb-201ENSMUST00000019649 CtifQ6PEE2 600 aaKnown RBP16.45■□□□□ 0.22
Ubb-201ENSMUST00000019649 FukQ7TMC8 1090 aa16.45■□□□□ 0.22
Ubb-201ENSMUST00000019649 Znf750Q8BH05 703 aa16.45■□□□□ 0.22
Ubb-201ENSMUST00000019649 Trpa1Q8BLA8 1125 aa16.45■□□□□ 0.22
Ubb-201ENSMUST00000019649 Ubr7Q8BU04 425 aa16.45■□□□□ 0.22
Ubb-201ENSMUST00000019649 Dusp19Q8K4T5 220 aa16.45■□□□□ 0.22
Ubb-201ENSMUST00000019649 IntS13Q8QZV7 732 aa16.45■□□□□ 0.22
Ubb-201ENSMUST00000019649 Ttc39cQ8VE09 580 aa16.45■□□□□ 0.22
Ubb-201ENSMUST00000019649 Slc12a6Q924N4 1150 aa16.45■□□□□ 0.22
Ubb-201ENSMUST00000019649 Abcg3Q99P81 650 aa16.45■□□□□ 0.22
Ubb-201ENSMUST00000019649 NapgQ9CWZ7 312 aa16.45■□□□□ 0.22
Ubb-201ENSMUST00000019649 Lamtor5Q9D1L9 91 aa16.45■□□□□ 0.22
Ubb-201ENSMUST00000019649 Aldh1a3Q9JHW9 512 aa16.45■□□□□ 0.22
Ubb-201ENSMUST00000019649 Nphs1Q9QZS7 1256 aa16.45■□□□□ 0.22
Ubb-201ENSMUST00000019649 Myo10F8VQB6 2062 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Plxnd1Q3UH93 1925 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Pde8aO88502 823 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Brms1lQ3U1T3 323 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Cyp2j11Q3UNV2 504 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Prdm6Q3UZD5 596 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Tmem237Q3V0J1 427 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Cct6bQ61390 531 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Cyp3a13Q64464 503 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Amer3Q6NS69 780 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 OcrlQ6NVF0 900 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Olfr213Q7TS32 327 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Tbx10Q810F8 385 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Zbtb46Q8BID6 600 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Slc6a17Q8BJI1 727 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Psmd5Q8BJY1 504 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Tph2Q8CGV2 488 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Olfr342Q8VGK7 312 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Ndufv2Q9D6J6 248 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Oser1Q9D722 291 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Xpo7Q9EPK7 1087 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Rtn3Q9ES97 964 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Herpud2Q9JJC9 404 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Uchl3Q9JKB1 230 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Wdr90Q6ZPG2 1874 aa16.44■□□□□ 0.22
Ubb-201ENSMUST00000019649 Igkv5-39A0A0G2JDV4 115 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Znf518bB2RRE4 1077 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Nxpe3B9EKK6 559 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Gm1758F6VZZ1 202 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Ptpn9O35239 593 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Opn1mwO35599 359 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Cbfa2t3O54972 620 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 AfpP02772 605 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Pth1rP41593 591 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 SykP48025 629 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Slc16a1P53986 493 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Zscan2Q07230 614 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Naf1Q3UMQ8 489 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Taar7aQ5QD12 358 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Trim25Q61510 634 aaKnown RBP16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Sema4cQ64151 834 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Foxl1Q64731 336 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Txndc8Q69AB2 127 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Tas2r129Q7M709 320 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Tubb2aQ7TMM9 445 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Q80Y73 168 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Bola2Q8BGS2 86 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Adamts2Q8C9W3 1213 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Cpa5Q8R4H4 436 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Cd207Q8VBX4 331 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Fbxo21Q8VDH1 627 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Pcdha3Q91Y16 942 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Adgre4Q91ZE5 689 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Gtf2a1Q99PM3 378 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Q9CQC3 228 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Tubb2bQ9CWF2 445 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Rdh14Q9ERI6 334 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Ndrg2Q9QYG0 371 aaKnown RBP16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Angptl2Q9R045 493 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Adgrf5G5E8Q8 1348 aa16.43■□□□□ 0.22
Ubb-201ENSMUST00000019649 Gm2956E9PVJ0 216 aa16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 Ccdc144bE9PVZ3 520 aa16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 Vmn2r11E9Q4X4 861 aa16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 AlpiF8VPQ6 554 aa16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 AlyrefO08583 255 aaKnown RBP16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 Uba1Q02053 1058 aaKnown RBP16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 NeblQ0II04 452 aa16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 PighQ5M9N4 188 aa16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 Rtl3Q6P1Y1 553 aa16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 C5ar2Q8BW93 344 aa16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 Cyp2d26Q8CIM7 500 aa16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 Prpf39Q8K2Z2 665 aa16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 Tram1l1Q8QZR0 363 aa16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 Cts3Q91ZD5 332 aa16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 Fam76aQ922G2 307 aa16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 Gtf2ird2Q99NI3 936 aa16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 IscuQ9D7P6 168 aa16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 Prmt1Q9JIF0 371 aa16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 Orc1Q9Z1N2 840 aaKnown RBP16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 Cacna1eQ61290 2272 aa16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 Gm13283A0A087WPG5 182 aa16.42■□□□□ 0.22
Ubb-201ENSMUST00000019649 Fam43bA2AM80 330 aa16.42■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms