RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 CMC1Q7Z7K0 106 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 NME8Q8N427 588 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 TEX9Q8N6V9 391 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 POU5F2Q8N7G0 328 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 TFB1MQ8WVM0 346 aaKnown RBP17.34■□□□□ 0.37
PHGDH-223ENST00000641597 FAM161BQ96MY7 647 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 NMRK1Q9NWW6 199 aa17.34■□□□□ 0.37
PHGDH-223ENST00000641597 PIN4Q9Y237 131 aaKnown RBP17.34■□□□□ 0.37
PHGDH-223ENST00000641597 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-223ENST00000641597 CAPN9O14815 690 aa17.33■□□□□ 0.36
PHGDH-223ENST00000641597 SORBS2O94875 1100 aaKnown RBP17.33■□□□□ 0.36
PHGDH-223ENST00000641597 SEMA5AQ13591 1074 aa17.33■□□□□ 0.36
PHGDH-223ENST00000641597 ANO7Q6IWH7 933 aa17.33■□□□□ 0.36
PHGDH-223ENST00000641597 OR6J1Q8NGC5 347 aa17.33■□□□□ 0.36
PHGDH-223ENST00000641597 DNAJB3Q8WWF6 145 aa17.33■□□□□ 0.36
PHGDH-223ENST00000641597 OLFM3Q96PB7 478 aa17.33■□□□□ 0.36
PHGDH-223ENST00000641597 OXCT2Q9BYC2 517 aaPredicted RBP17.33■□□□□ 0.36
PHGDH-223ENST00000641597 SBF1O95248 1867 aa17.33■□□□□ 0.36
PHGDH-223ENST00000641597 PGM1P36871 562 aa17.33■□□□□ 0.36
PHGDH-223ENST00000641597 AFF1P51825 1210 aaKnown RBP17.33■□□□□ 0.36
PHGDH-223ENST00000641597 SLC8A3P57103 927 aa17.33■□□□□ 0.36
PHGDH-223ENST00000641597 PEX6Q13608 980 aa17.33■□□□□ 0.36
PHGDH-223ENST00000641597 CRYMQ14894 314 aa17.33■□□□□ 0.36
PHGDH-223ENST00000641597 STILQ15468 1287 aa17.33■□□□□ 0.36
PHGDH-223ENST00000641597 FASTKD5Q7L8L6 764 aaKnown RBP17.33■□□□□ 0.36
PHGDH-223ENST00000641597 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.33■□□□□ 0.36
PHGDH-223ENST00000641597 BEST2Q8NFU1 509 aa17.33■□□□□ 0.36
PHGDH-223ENST00000641597 ZFP42Q96MM3 310 aa17.33■□□□□ 0.36
PHGDH-223ENST00000641597 PRDM12Q9H4Q4 367 aa17.33■□□□□ 0.36
PHGDH-223ENST00000641597 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.33■□□□□ 0.369e-8■■■□□ 19.1
PHGDH-223ENST00000641597 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.33■□□□□ 0.36
PHGDH-223ENST00000641597 LRRC42Q9Y546 428 aa17.33■□□□□ 0.36
PHGDH-223ENST00000641597 SNX10Q9Y5X0 201 aa17.33■□□□□ 0.36
PHGDH-223ENST00000641597 PDHXO00330 501 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 KLF11O14901 512 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 DGKIO75912 1065 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 PRKCGP05129 697 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 CD1EP15812 388 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 BCAT1P54687 386 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 DPP9Q86TI2 863 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 RSPH3Q86UC2 560 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 TNS4Q8IZW8 715 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 UCMAQ8WVF2 138 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 C7orf26Q96N11 449 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 APOL2Q9BQE5 337 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 XPNPEP3Q9NQH7 507 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 A0A0A0MRY4 1105 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 DYNC1LI2O43237 492 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-223ENST00000641597 MAP3K13O43283 966 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 SNNO75324 88 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-223ENST00000641597 TPSB2P20231 275 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 CRHR1P34998 444 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 STX3Q13277 289 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 TPSAB1Q15661 275 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 LGSNQ5TDP6 509 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 KIAA0319Q5VV43 1072 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 ARHGAP17Q68EM7 881 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 ALKAL1Q6UXT8 129 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 PACS1Q6VY07 963 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 ZNF567Q8N184 647 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 PGBD4Q96DM1 585 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 SPATA13Q96N96 652 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 FCRL3Q96P31 734 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-223ENST00000641597 DCLRE1BQ9H816 532 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 PIGVQ9NUD9 493 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 PNPOQ9NVS9 261 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 FZD10Q9ULW2 581 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 TIMM13Q9Y5L4 95 aaPredicted RBP17.32■□□□□ 0.36
PHGDH-223ENST00000641597 DOCK3Q8IZD9 2030 aa17.32■□□□□ 0.36
PHGDH-223ENST00000641597 GOLGA8TH3BQL2 631 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 NRP1O14786 923 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 WASHC5Q12768 1159 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 DLG2Q15700 870 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 CCDC6Q16204 474 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 SPDYAQ5MJ70 313 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 SNX30Q5VWJ9 437 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 MAVSQ7Z434 540 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.31■□□□□ 0.365e-6■■■■■ 81.8
PHGDH-223ENST00000641597 EFCAB3Q8N7B9 438 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 PPP1R14CQ8TAE6 165 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 AGR3Q8TD06 166 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 RNF139Q8WU17 664 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 SPDL1Q96EA4 605 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 THTPAQ9BU02 230 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 SNX25Q9H3E2 840 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 VTA1Q9NP79 307 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 TMEM30AQ9NV96 361 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 KCNK4Q9NYG8 393 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 DNAJC16Q9Y2G8 782 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 M0QYT0 321 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 PIRO00625 290 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 MBLAC2Q68D91 279 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 CRLF3Q8IUI8 442 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 C10orf107Q8IVU9 208 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 KBTBD2Q8IY47 623 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 SMC1BQ8NDV3 1235 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 ACVR1CQ8NER5 493 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 OR52K1Q8NGK4 314 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 FBXO41Q8TF61 875 aa17.31■□□□□ 0.36
PHGDH-223ENST00000641597 AGAP2Q99490 1192 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms