RNA–Protein interactions for RNA: ENST00000641012.1

MACF1-234, Transcript of microtubule-actin crosslinking factor 1, humanhuman

BASIC

Gene MACF1, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-234ENST00000641012 CFAP52Q8N1V2 620 aa11.26□□□□□ -0.61
MACF1-234ENST00000641012 ZNF557Q8N988 423 aaPredicted RBP11.26□□□□□ -0.61
MACF1-234ENST00000641012 NETO2Q8NC67 525 aa11.26□□□□□ -0.61
MACF1-234ENST00000641012 ACTRT1Q8TDG2 376 aa11.26□□□□□ -0.61
MACF1-234ENST00000641012 SPATA17Q96L03 361 aa11.26□□□□□ -0.61
MACF1-234ENST00000641012 ZBTB18Q99592 522 aa11.26□□□□□ -0.61
MACF1-234ENST00000641012 CENPKQ9BS16 269 aa11.26□□□□□ -0.61
MACF1-234ENST00000641012 DDX23Q9BUQ8 820 aaKnown RBP11.26□□□□□ -0.61
MACF1-234ENST00000641012 MPP6Q9NZW5 540 aa11.26□□□□□ -0.61
MACF1-234ENST00000641012 DMGDHQ9UI17 866 aaKnown RBP11.26□□□□□ -0.61
MACF1-234ENST00000641012 DNPEPQ9ULA0 475 aa11.26□□□□□ -0.61
MACF1-234ENST00000641012 HEATR9A2RTY3 570 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 CAND2O75155 1236 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 CYBAP13498 195 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 PRLRP16471 622 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 ERCC2P18074 760 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 RABGGTBP53611 331 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 GABPB1Q06547 395 aaPredicted RBP11.25□□□□□ -0.61
MACF1-234ENST00000641012 PAPD7Q5XG87 772 aaKnown RBP11.25□□□□□ -0.61
MACF1-234ENST00000641012 PMF1Q6P1K2 205 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 RGL4Q8IZJ4 473 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 MMGT1Q8N4V1 131 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 RNF217Q8TC41 542 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.25□□□□□ -0.61
MACF1-234ENST00000641012 EXOC2Q96KP1 924 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 ZYG11BQ9C0D3 744 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 ISCUQ9H1K1 167 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 AGO3Q9H9G7 860 aaKnown RBP11.25□□□□□ -0.61
MACF1-234ENST00000641012 SHOC2Q9UQ13 582 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 SRP72O76094 671 aaKnown RBP11.25□□□□□ -0.61
MACF1-234ENST00000641012 DDHD2O94830 711 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 TRIM16O95361 564 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 SNRPAP09012 282 aaKnown RBP11.25□□□□□ -0.61
MACF1-234ENST00000641012 MMP8P22894 467 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 PBLDP30039 288 aaPredicted RBP11.25□□□□□ -0.61
MACF1-234ENST00000641012 FLT3P36888 993 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 MMP13P45452 471 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 SERPINB9P50453 376 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 C1QTNF8P60827 252 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 TTLL9Q3SXZ7 439 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 ERAP2Q6P179 960 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 PTAR1Q7Z6K3 402 aaPredicted RBP11.25□□□□□ -0.61
MACF1-234ENST00000641012 FBXO36Q8NEA4 188 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 PKNOX2Q96KN3 472 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 NAT9Q9BTE0 207 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 CLPBQ9H078 707 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 APOBEC3GQ9HC16 384 aaKnown RBP11.25□□□□□ -0.61
MACF1-234ENST00000641012 CD274Q9NZQ7 290 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 PSMC3IPQ9P2W1 217 aaPredicted RBP11.25□□□□□ -0.61
MACF1-234ENST00000641012 COL2A1P02458 1487 aaPredicted RBP11.25□□□□□ -0.61
MACF1-234ENST00000641012 FOXD4Q12950 439 aaPredicted RBP11.25□□□□□ -0.61
MACF1-234ENST00000641012 CCDC85BQ15834 202 aaPredicted RBP11.25□□□□□ -0.61
MACF1-234ENST00000641012 MORN1Q5T089 497 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 KIAA1324Q6UXG2 1013 aaKnown RBP11.25□□□□□ -0.61
MACF1-234ENST00000641012 BAIAP2L1Q9UHR4 511 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 APOBEC2Q9Y235 224 aaKnown RBP11.25□□□□□ -0.61
MACF1-234ENST00000641012 VPS9D1Q9Y2B5 631 aa11.25□□□□□ -0.61
MACF1-234ENST00000641012 APOC4-APOC2K7ER74 178 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 RNF225M0QZC1 329 aaPredicted RBP11.24□□□□□ -0.61
MACF1-234ENST00000641012 APOC2P02655 101 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 GOT1P17174 413 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 NR2C2P49116 596 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 MMRN1Q13201 1228 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 RBBP7Q16576 425 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 TTC7BQ86TV6 843 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 SLC4A11Q8NBS3 891 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 PCDHB18PQ96TA0 734 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 PRDM12Q9H4Q4 367 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 ZDHHC6Q9H6R6 413 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 SENP1Q9P0U3 644 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 DNAJC25-GNG10A0A024R161 153 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 TBC1D4O60343 1298 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 ZNF135P52742 658 aaPredicted RBP11.24□□□□□ -0.61
MACF1-234ENST00000641012 ATXN3P54252 364 aaPredicted RBP11.24□□□□□ -0.61
MACF1-234ENST00000641012 ART3Q13508 389 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 DBN1Q16643 649 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 RARS2Q5T160 578 aaKnown RBP11.24□□□□□ -0.61
MACF1-234ENST00000641012 ARMC6Q6NXE6 501 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 AADACL2Q6P093 401 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 GIMAP7Q8NHV1 300 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 CLDND1Q9NY35 253 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 PKD2L2Q9NZM6 624 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 FLRT1Q9NZU1 646 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 TRMT6Q9UJA5 497 aaKnown RBP11.24□□□□□ -0.61
MACF1-234ENST00000641012 NCKAP1Q9Y2A7 1128 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 UBR2Q8IWV8 1755 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 FGF10O15520 208 aaPredicted RBP11.24□□□□□ -0.61
MACF1-234ENST00000641012 PRPF4O43172 522 aaKnown RBP eCLIP11.24□□□□□ -0.61
MACF1-234ENST00000641012 IL1BP01584 269 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 ERBB2P04626 1255 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 HMOX2P30519 316 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 PPP2R2AP63151 447 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 IRF5Q13568 498 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 AARS2Q5JTZ9 985 aaKnown RBP11.24□□□□□ -0.61
MACF1-234ENST00000641012 ACAD11Q709F0 780 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 HJURPQ8NCD3 748 aaPredicted RBP11.24□□□□□ -0.61
MACF1-234ENST00000641012 TFAP2BQ92481 460 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 POLR1EQ9GZS1 481 aaKnown RBP11.24□□□□□ -0.61
MACF1-234ENST00000641012 NSMCE4AQ9NXX6 385 aa11.24□□□□□ -0.61
MACF1-234ENST00000641012 PDZK1P1A8MUH7 402 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms