RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 GPR78Q96P69 363 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 MYLK2Q9H1R3 596 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 PCDHGB3Q9Y5G1 929 aa6.32□□□□□ -1.4
RTTN-217ENST00000640393 NDUFS1P28331 727 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 MTA1Q13330 715 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 NFRKBQ6P4R8 1299 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 DHRS13Q6UX07 377 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 TFAP2DQ7Z6R9 452 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 YTHDF3Q7Z739 585 aaKnown RBP6.31□□□□□ -1.4
RTTN-217ENST00000640393 OTUD7AQ8TE49 926 aaPredicted RBP6.31□□□□□ -1.4
RTTN-217ENST00000640393 GOLGA1Q92805 767 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 TRIM63Q969Q1 353 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 TBC1D20Q96BZ9 403 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 TRMT61AQ96FX7 289 aaKnown RBP6.31□□□□□ -1.4
RTTN-217ENST00000640393 PRDM8Q9NQV8 689 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 RXFP3Q9NSD7 469 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 LIN7CQ9NUP9 197 aaKnown RBP6.31□□□□□ -1.4
RTTN-217ENST00000640393 GAR1Q9NY12 217 aaKnown RBP6.31□□□□□ -1.4
RTTN-217ENST00000640393 KCND3Q9UK17 655 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 ZBTB1Q9Y2K1 713 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 SPATA31A1Q5TZJ5 1347 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 WIPF3A6NGB9 483 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 EFCAB8A8MWE9 144 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 PPP6CO00743 305 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 RRHO14718 337 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 DSCR3O14972 297 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 NKX2-8O15522 239 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 EPHB2P29323 1055 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 TACR3P29371 465 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 HOXD12P35452 270 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 GRK6P43250 576 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 ABCG1P45844 678 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 PRKAA2P54646 552 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 PDCLQ13371 301 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 SRSF7Q16629 238 aaKnown RBP eCLIP6.31□□□□□ -1.4
RTTN-217ENST00000640393 FAM110CQ1W6H9 321 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 LRRC24Q50LG9 513 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 SYCE2Q6PIF2 218 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 RAB11FIP2Q7L804 512 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 SUGP1Q8IWZ8 645 aaKnown RBP6.31□□□□□ -1.4
RTTN-217ENST00000640393 GALNT15Q8N3T1 639 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 SRFBP1Q8NEF9 429 aaKnown RBP6.31□□□□□ -1.4
RTTN-217ENST00000640393 CLEC4CQ8WTT0 213 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 TRAPPC12Q8WVT3 735 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 PIGKQ92643 395 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 MAP4K1Q92918 833 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 ABHD14AQ9BUJ0 271 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 TM2D2Q9BX73 214 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 TRIM2Q9C040 744 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 SEMA5BQ9P283 1151 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 SRP68Q9UHB9 627 aaKnown RBP6.31□□□□□ -1.4
RTTN-217ENST00000640393 MAFFQ9ULX9 164 aa6.31□□□□□ -1.4
RTTN-217ENST00000640393 SETD1BQ9UPS6 1966 aaKnown RBP6.3□□□□□ -1.4
RTTN-217ENST00000640393 SMIM35A0A1B0GVV1 85 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 SLC38A8A6NNN8 435 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 KCNU1A8MYU2 1149 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 LARGE1O95461 756 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 TUBB4AP04350 444 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 ST6GAL1P15907 406 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 IDUAP35475 653 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 SLC37A1P57057 533 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 RBM6P78332 1123 aaKnown RBP6.3□□□□□ -1.4
RTTN-217ENST00000640393 SHC2P98077 582 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 CUL4BQ13620 913 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 SUPT20HL1Q3ZLR7 823 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 GALNTL6Q49A17 601 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 SLC18B1Q6NT16 456 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 SLC2A7Q6PXP3 512 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 SYT13Q7L8C5 426 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 SPATA5Q8NB90 893 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 RSC1A1Q92681 617 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 RILPL2Q969X0 211 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 SENP7Q9BQF6 1050 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 HERPUD2Q9BSE4 406 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 SCNM1Q9BWG6 230 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 ITM2CQ9NQX7 267 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 NFU1Q9UMS0 254 aa6.3□□□□□ -1.4
RTTN-217ENST00000640393 GXYLT2A0PJZ3 443 aa6.29□□□□□ -1.4
RTTN-217ENST00000640393 H0Y3Z8 333 aa6.29□□□□□ -1.4
RTTN-217ENST00000640393 VEGFAP15692 232 aaPredicted RBP6.29□□□□□ -1.4
RTTN-217ENST00000640393 SFPQP23246 707 aaKnown RBP eCLIP6.29□□□□□ -1.4
RTTN-217ENST00000640393 SERPINA4P29622 427 aa6.29□□□□□ -1.4
RTTN-217ENST00000640393 TAS2R50P59544 299 aa6.29□□□□□ -1.4
RTTN-217ENST00000640393 MRPS21P82921 87 aaKnown RBP6.29□□□□□ -1.4
RTTN-217ENST00000640393 ANXA2RQ3ZCQ2 193 aa6.29□□□□□ -1.4
RTTN-217ENST00000640393 ZNF813Q6ZN06 617 aa6.29□□□□□ -1.4
RTTN-217ENST00000640393 AFG1LQ8WV93 481 aa6.29□□□□□ -1.4
RTTN-217ENST00000640393 CPT1BQ92523 772 aa6.29□□□□□ -1.4
RTTN-217ENST00000640393 FCRL5Q96RD9 977 aa6.29□□□□□ -1.4
RTTN-217ENST00000640393 OSBPL5Q9H0X9 879 aaPredicted RBP6.29□□□□□ -1.4
RTTN-217ENST00000640393 AGO4Q9HCK5 861 aaKnown RBP6.29□□□□□ -1.4
RTTN-217ENST00000640393 MLXIPLQ9NP71 852 aa6.29□□□□□ -1.4
RTTN-217ENST00000640393 KCNK9Q9NPC2 374 aa6.29□□□□□ -1.4
RTTN-217ENST00000640393 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.29□□□□□ -1.4
RTTN-217ENST00000640393 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.29□□□□□ -1.4
RTTN-217ENST00000640393 C19orf53Q9UNZ5 99 aaPredicted RBP6.29□□□□□ -1.4
RTTN-217ENST00000640393 FRMD4BQ9Y2L6 1034 aa6.29□□□□□ -1.4
RTTN-217ENST00000640393 E7EVH7 732 aa6.28□□□□□ -1.4
RTTN-217ENST00000640393 LATS1O95835 1130 aa6.28□□□□□ -1.4
RTTN-217ENST00000640393 ENO1P06733 434 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms