RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 LPIN1Q14693 890 aa12.77□□□□□ -0.37
SPIN3-236ENST00000640131 CNGA3Q16281 694 aa12.77□□□□□ -0.37
SPIN3-236ENST00000640131 ZNF484Q5JVG2 852 aa12.77□□□□□ -0.37
SPIN3-236ENST00000640131 LDLRAD1Q5T700 205 aa12.77□□□□□ -0.37
SPIN3-236ENST00000640131 ANKRD22Q5VYY1 191 aa12.77□□□□□ -0.37
SPIN3-236ENST00000640131 CCDC89Q8N998 374 aa12.77□□□□□ -0.37
SPIN3-236ENST00000640131 PPTC7Q8NI37 304 aa12.77□□□□□ -0.37
SPIN3-236ENST00000640131 STMN2Q93045 179 aa12.77□□□□□ -0.37
SPIN3-236ENST00000640131 PEBP4Q96S96 227 aa12.77□□□□□ -0.37
SPIN3-236ENST00000640131 PTPN18Q99952 460 aa12.77□□□□□ -0.37
SPIN3-236ENST00000640131 DPEP3Q9H4B8 488 aa12.77□□□□□ -0.37
SPIN3-236ENST00000640131 NGRNQ9NPE2 291 aaKnown RBP12.77□□□□□ -0.37
SPIN3-236ENST00000640131 GJD2Q9UKL4 321 aa12.77□□□□□ -0.37
SPIN3-236ENST00000640131 NEU2Q9Y3R4 380 aa12.77□□□□□ -0.37
SPIN3-236ENST00000640131 TMEM120BA0PK00 339 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 MMP3P08254 477 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 MSL3P1P0C860 447 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 KLRC2P26717 231 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 SLC26A2P50443 739 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 DSG1Q02413 1049 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 EFTUD2Q15029 972 aaKnown RBP eCLIP12.76□□□□□ -0.37
SPIN3-236ENST00000640131 GOLGA7BQ2TAP0 167 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 ACSBG2Q5FVE4 666 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 ZNF618Q5T7W0 954 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 KLHDC10Q6PID8 442 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 DSTYKQ6XUX3 929 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 CROCCP3Q8IVE0 287 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 SCUBE3Q8IX30 993 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 CLEC4CQ8WTT0 213 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 RUNDC3BQ96NL0 473 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 ZNF212Q9UDV6 495 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 TCRBV7S3A2A0A539 114 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 TBKBP1A7MCY6 615 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 FAM47E-STBD1D6RA91 191 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 IL18RAPO95256 599 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 ADORA2BP29275 332 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 MAGEA4P43358 317 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 ATXN1P54253 815 aaKnown RBP12.76□□□□□ -0.37
SPIN3-236ENST00000640131 SLC25A11Q02978 314 aaKnown RBP12.76□□□□□ -0.37
SPIN3-236ENST00000640131 MPP2Q14168 576 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 PIGHQ14442 188 aaPredicted RBP12.76□□□□□ -0.37
SPIN3-236ENST00000640131 HIC1Q14526 733 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 NR1D2Q14995 579 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 ANKDD1AQ495B1 522 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 PPP1R26Q5T8A7 1209 aaPredicted RBP12.76□□□□□ -0.37
SPIN3-236ENST00000640131 FAXCQ5TGI0 409 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 FAM183BPQ6ZVS7 135 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 GRAMD2AQ8IUY3 354 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 ESX1Q8N693 406 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 FAM71DQ8N9W8 422 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 DDHD1Q8NEL9 900 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 BCO2Q9BYV7 579 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.76□□□□□ -0.37
SPIN3-236ENST00000640131 STX18Q9P2W9 335 aaKnown RBP12.76□□□□□ -0.37
SPIN3-236ENST00000640131 PCDHGC3Q9UN70 934 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 RBMX2Q9Y388 322 aaKnown RBP12.76□□□□□ -0.37
SPIN3-236ENST00000640131 NME7Q9Y5B8 376 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 NR2E3Q9Y5X4 410 aa12.76□□□□□ -0.37
SPIN3-236ENST00000640131 SYNJ2BP-COX16A0A087WUM0 186 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 NOTOA8MTQ0 251 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 TFE3P19532 575 aaPredicted RBP12.75□□□□□ -0.37
SPIN3-236ENST00000640131 ENPP1P22413 925 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 YARSP54577 528 aaKnown RBP12.75□□□□□ -0.37
SPIN3-236ENST00000640131 GRM1Q13255 1194 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 ACVR2BQ13705 512 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 CCL14Q16627 93 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 MYLK3Q32MK0 819 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 WDR45BQ5MNZ6 344 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 UNC45BQ8IWX7 931 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 OR6B3Q8NGW1 331 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 DNAJB3Q8WWF6 145 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 NDRG1Q92597 394 aaKnown RBP12.75□□□□□ -0.37
SPIN3-236ENST00000640131 COX16Q9P0S2 106 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 FUOMA2VDF0 154 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 GLTPD2A6NH11 291 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 MED7O43513 233 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 CELF2O95319 508 aaKnown RBP12.75□□□□□ -0.37
SPIN3-236ENST00000640131 PGM3O95394 542 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 AGTP01019 485 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 MCF2P10911 925 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 UBL4AP11441 157 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 PDGFRAP16234 1089 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 IGFBP6P24592 240 aaPredicted RBP12.75□□□□□ -0.37
SPIN3-236ENST00000640131 CDH6P55285 790 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 BASP1P80723 227 aaKnown RBP12.75□□□□□ -0.37
SPIN3-236ENST00000640131 PDIA2Q13087 525 aaKnown RBP12.75□□□□□ -0.37
SPIN3-236ENST00000640131 SMAD1Q15797 465 aaKnown RBP12.75□□□□□ -0.37
SPIN3-236ENST00000640131 FAM117BQ6P1L5 589 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 TRMT10CQ7L0Y3 403 aaKnown RBP12.75□□□□□ -0.37
SPIN3-236ENST00000640131 FAM20CQ8IXL6 584 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 RXFP2Q8WXD0 754 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 SLCO2A1Q92959 643 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 COX4I2Q96KJ9 171 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 ECSITQ9BQ95 431 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 KATNBL1Q9H079 304 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 COQ6Q9Y2Z9 468 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 LAMA2P24043 3122 aaKnown RBP12.75□□□□□ -0.37
SPIN3-236ENST00000640131 XPOTO43592 962 aaKnown RBP12.75□□□□□ -0.37
SPIN3-236ENST00000640131 STRNO43815 780 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 CCDC130P13994 396 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms