RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 DUX5Q96PT3 197 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 FRMD8Q9BZ67 464 aaPredicted RBP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 PLEKHA4Q9H4M7 779 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 TDP1Q9NUW8 608 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 HS3ST3B1Q9Y662 390 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 USP9XQ93008 2570 aaPredicted RBP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 SOS1Q07889 1333 aaPredicted RBP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 LILRA5A6NI73 299 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 BTN3A1O00481 513 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 NKX2-8O15522 239 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 EDIL3O43854 480 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ANXA6P08133 673 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 NPSP0C0P6 89 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 GP1BBP13224 206 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 RHCEP18577 417 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 HTR1BP28222 390 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 TACR3P29371 465 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 FMO4P31512 558 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ME1P48163 572 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 MVDP53602 400 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 RHDQ02161 417 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 FPGSQ05932 587 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 CRYZQ08257 329 aaKnown RBP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 GAGE5Q13069 117 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 GAGE6Q13070 117 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ATP2B3Q16720 1220 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 DCAF12L1Q5VU92 463 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ZNF793Q6ZN11 406 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 Q6ZR54 194 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ARMC9Q7Z3E5 817 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 YTHDF3Q7Z739 585 aaKnown RBP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 ABHD11Q8NFV4 315 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 OR1N1Q8NGS0 311 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 DENND1AQ8TEH3 1009 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 USP7Q93009 1102 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 HSPBAP1Q96EW2 488 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 SLITRK1Q96PX8 696 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 C7orf25Q9BPX7 421 aa0.27□□□□□ -2.37
CCDC7-215ENST00000639629 CAMSAP3Q9P1Y5 1249 aaPredicted RBP0.27□□□□□ -2.37
CCDC7-215ENST00000639629 USP19O94966 1318 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 ATXN2Q99700 1313 aaKnown RBP0.26□□□□□ -2.37
CCDC7-215ENST00000639629 TP53BP1Q12888 1972 aaPredicted RBP0.26□□□□□ -2.37
CCDC7-215ENST00000639629 SIGLEC1Q9BZZ2 1709 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 SCN5AQ14524 2016 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 CHD8Q9HCK8 2581 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 HNRNPDLO14979 420 aaKnown RBP0.26□□□□□ -2.37
CCDC7-215ENST00000639629 TMPRSS11DO60235 418 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 TULP3O75386 442 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 KHDRBS3O75525 346 aaKnown RBP0.26□□□□□ -2.37
CCDC7-215ENST00000639629 ENO1P06733 434 aaKnown RBP0.26□□□□□ -2.37
CCDC7-215ENST00000639629 HOXB5P09067 269 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 CFC1BP0CG36 223 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 CFC1P0CG37 223 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 PLA2G2AP14555 144 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 GJC1P36383 396 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 RFX5P48382 616 aaPredicted RBP0.26□□□□□ -2.37
CCDC7-215ENST00000639629 BMS1Q14692 1282 aaKnown RBP0.26□□□□□ -2.37
CCDC7-215ENST00000639629 MAPKAPK3Q16644 382 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 TMEM30BQ3MIR4 351 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 GRHL2Q6ISB3 625 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 TMEM88Q6PEY1 159 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 TRABD2AQ86V40 505 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 AOPEPQ8N6M6 819 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 METTL25Q8N6Q8 603 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 FAM216AQ8WUB2 273 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 NPIPB3Q92617 1050 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 DAZAP1Q96EP5 407 aaKnown RBP0.26□□□□□ -2.37
CCDC7-215ENST00000639629 MACROD1Q9BQ69 325 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 PACSIN1Q9BY11 444 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 ZSWIM4Q9H7M6 989 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 Q9N2J8 555 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 NOP58Q9Y2X3 529 aaKnown RBP0.26□□□□□ -2.37
CCDC7-215ENST00000639629 PCNX3Q9H6A9 2034 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 LTBP4Q8N2S1 1624 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 A0A1W2PP11 408 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 GOLGA6L9A6NEM1 432 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 IL4RP24394 825 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 PTPN7P35236 360 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 SLC16A2P36021 539 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 POU3F1Q03052 451 aaPredicted RBP0.26□□□□□ -2.37
CCDC7-215ENST00000639629 RUNX1T1Q06455 604 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 SEMA3BQ13214 749 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 RBMS2Q15434 407 aaKnown RBP0.26□□□□□ -2.37
CCDC7-215ENST00000639629 PRAMEF17Q5VTA0 474 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 ZNF324BQ6AW86 544 aaPredicted RBP0.26□□□□□ -2.37
CCDC7-215ENST00000639629 ERAP2Q6P179 960 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 NFE4Q86UQ8 179 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 FAM47BQ8NA70 645 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 PPM1EQ8WY54 764 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 GPR101Q96P66 508 aaPredicted RBP0.26□□□□□ -2.37
CCDC7-215ENST00000639629 WDR77Q9BQA1 342 aaPredicted RBP0.26□□□□□ -2.37
CCDC7-215ENST00000639629 SARGQ9BW04 601 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 FZD3Q9NPG1 666 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 DDX56Q9NY93 547 aaKnown RBP0.26□□□□□ -2.37
CCDC7-215ENST00000639629 SAP30BPQ9UHR5 308 aaKnown RBP0.26□□□□□ -2.37
CCDC7-215ENST00000639629 HDAC5Q9UQL6 1122 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 SNX14Q9Y5W7 946 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 PRSS21Q9Y6M0 314 aa0.26□□□□□ -2.37
CCDC7-215ENST00000639629 AHDC1Q5TGY3 1603 aaPredicted RBP0.26□□□□□ -2.37
CCDC7-215ENST00000639629 ARHGEF17Q96PE2 2063 aaPredicted RBP0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms