RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 PLIN4Q96Q06 1357 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 POPDC2Q9HBU9 364 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 LRRC4CQ9HCJ2 640 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 PCDHB7Q9Y5E2 793 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 GOT1P17174 413 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 NOS2P35228 1153 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 PLEKHA7Q6IQ23 1121 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 IZUMO2Q6UXV1 221 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 HS6ST3Q8IZP7 471 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 MBOAT7Q96N66 472 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 CATSPER2Q96P56 530 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 PTPRHQ9HD43 1115 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 TRMT6Q9UJA5 497 aaKnown RBP14.78□□□□□ -0.04
SCARB2-216ENST00000639300 ALOX15BO15296 676 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 SCNN1GP51170 649 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 PLOD1Q02809 727 aaPredicted RBP14.78□□□□□ -0.04
SCARB2-216ENST00000639300 TIGD7Q6NT04 549 aaPredicted RBP14.78□□□□□ -0.04
SCARB2-216ENST00000639300 BNC2Q6ZN30 1099 aaPredicted RBP14.78□□□□□ -0.04
SCARB2-216ENST00000639300 PLPPR4Q7Z2D5 763 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 OR12D3Q9UGF7 316 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 SNX13Q9Y5W8 968 aa14.78□□□□□ -0.04
SCARB2-216ENST00000639300 SOAT2O75908 522 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 MYO1DO94832 1006 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 CHRNB2P17787 502 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 BST1Q10588 318 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 CDH18Q13634 790 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 IQSEC1Q6DN90 963 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 TAF2Q6P1X5 1199 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 YTHDF3Q7Z739 585 aaKnown RBP14.77□□□□□ -0.04
SCARB2-216ENST00000639300 TRABD2AQ86V40 505 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 AGAP11Q8TF27 550 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 ACSS3Q9H6R3 686 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 GID8Q9NWU2 228 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 CRLS1Q9UJA2 301 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 PCDHA2Q9Y5H9 948 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 CBX4O00257 560 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 ASMTLO95671 621 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 PGAM1P18669 254 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 CD151P48509 253 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 NAGLUP54802 743 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 FCGRTP55899 365 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 TMEM169Q96HH4 297 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 CNBD2Q96M20 576 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 COLEC11Q9BWP8 271 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 NOCTQ9UK39 431 aaKnown RBP14.77□□□□□ -0.04
SCARB2-216ENST00000639300 SOX13Q9UN79 622 aa14.77□□□□□ -0.04
SCARB2-216ENST00000639300 A0A0A0MRY4 1105 aa14.77□□□□□ -0.05
SCARB2-216ENST00000639300 CLDN5O00501 218 aa14.77□□□□□ -0.05
SCARB2-216ENST00000639300 DDHD2O94830 711 aa14.77□□□□□ -0.05
SCARB2-216ENST00000639300 CDK16Q00536 496 aa14.77□□□□□ -0.05
SCARB2-216ENST00000639300 TBL3Q12788 808 aaKnown RBP14.77□□□□□ -0.05
SCARB2-216ENST00000639300 FASTKD3Q14CZ7 662 aaKnown RBP14.77□□□□□ -0.05
SCARB2-216ENST00000639300 EML3Q32P44 896 aa14.77□□□□□ -0.05
SCARB2-216ENST00000639300 IYDQ6PHW0 289 aa14.77□□□□□ -0.05
SCARB2-216ENST00000639300 LBX2Q6XYB7 198 aa14.77□□□□□ -0.05
SCARB2-216ENST00000639300 SPATA13Q96N96 652 aa14.77□□□□□ -0.05
SCARB2-216ENST00000639300 TBC1D10AQ9BXI6 508 aa14.77□□□□□ -0.05
SCARB2-216ENST00000639300 RNF112Q9ULX5 631 aa14.77□□□□□ -0.05
SCARB2-216ENST00000639300 SH3BP1Q9Y3L3 701 aa14.77□□□□□ -0.05
SCARB2-216ENST00000639300 TCRBV9S1A1TA0A576 114 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 C2orf81A6NN90 581 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 TRDMT1O14717 391 aaKnown RBP14.76□□□□□ -0.05
SCARB2-216ENST00000639300 CREB1P16220 341 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 DSG1Q02413 1049 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 PDK4Q16654 411 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 UNC5AQ6ZN44 842 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 RNF168Q8IYW5 571 aaPredicted RBP14.76□□□□□ -0.05
SCARB2-216ENST00000639300 LRRC39Q96DD0 335 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 SMARCD1Q96GM5 515 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 C12orf65Q9H3J6 166 aaKnown RBP14.76□□□□□ -0.05
SCARB2-216ENST00000639300 RNPEPQ9H4A4 650 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 ST6GALNAC4Q9H4F1 302 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 DHX33Q9H6R0 707 aaKnown RBP14.76□□□□□ -0.05
SCARB2-216ENST00000639300 DMAP1Q9NPF5 467 aaPredicted RBP14.76□□□□□ -0.05
SCARB2-216ENST00000639300 NALCNQ8IZF0 1738 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 LRCH4O75427 683 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 PROCP04070 461 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 DDX39BQ13838 428 aaKnown RBP14.76□□□□□ -0.05
SCARB2-216ENST00000639300 FSCN1Q16658 493 aaKnown RBP14.76□□□□□ -0.05
SCARB2-216ENST00000639300 GALNTL6Q49A17 601 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 UNC93AQ86WB7 457 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 TEKT4Q8WW24 435 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 SMPD4Q9NXE4 827 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 KIF17Q9P2E2 1029 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 KCPQ6ZWJ8 1503 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 TMEM247A6NEH6 219 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 CHADO15335 359 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 CKMP06732 381 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 PTK2BQ14289 1009 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 TRMT5Q32P41 509 aaKnown RBP14.76□□□□□ -0.05
SCARB2-216ENST00000639300 CCT7Q99832 543 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 THUMPD3Q9BV44 507 aaKnown RBP14.76□□□□□ -0.05
SCARB2-216ENST00000639300 PKD2L2Q9NZM6 624 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 PACSIN3Q9UKS6 424 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 SNED1Q8TER0 1413 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 FANCGO15287 622 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 BUD23O43709 281 aaKnown RBP14.76□□□□□ -0.05
SCARB2-216ENST00000639300 UNC5CO95185 931 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 ERBB2P04626 1255 aa14.76□□□□□ -0.05
SCARB2-216ENST00000639300 ANKRD52Q8NB46 1076 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms