RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 STK10O94804 968 aaKnown RBP22.18■■□□□ 1.14
CLN6-224ENST00000638076 LTFP02788 710 aa22.18■■□□□ 1.14
CLN6-224ENST00000638076 GLUD2P49448 558 aa22.18■■□□□ 1.14
CLN6-224ENST00000638076 SARNPP82979 210 aaKnown RBP22.18■■□□□ 1.14
CLN6-224ENST00000638076 PAFAH1B3Q15102 231 aaKnown RBP22.18■■□□□ 1.14
CLN6-224ENST00000638076 GSDMBQ8TAX9 411 aa22.18■■□□□ 1.14
CLN6-224ENST00000638076 RTP3Q9BQQ7 232 aa22.18■■□□□ 1.14
CLN6-224ENST00000638076 PRDM12Q9H4Q4 367 aa22.18■■□□□ 1.14
CLN6-224ENST00000638076 DCLK1O15075 740 aa22.18■■□□□ 1.14
CLN6-224ENST00000638076 B3GAT3O94766 335 aa22.18■■□□□ 1.14
CLN6-224ENST00000638076 ODC1P11926 461 aa22.18■■□□□ 1.14
CLN6-224ENST00000638076 AIF1P55008 147 aa22.18■■□□□ 1.14
CLN6-224ENST00000638076 CACNB2Q08289 660 aaPredicted RBP22.18■■□□□ 1.14
CLN6-224ENST00000638076 KCNA10Q16322 511 aa22.18■■□□□ 1.14
CLN6-224ENST00000638076 TRMT10BQ6PF06 316 aaKnown RBP22.18■■□□□ 1.14
CLN6-224ENST00000638076 TP53INP2Q8IXH6 220 aa22.18■■□□□ 1.14
CLN6-224ENST00000638076 MYLPFQ96A32 169 aa22.18■■□□□ 1.14
CLN6-224ENST00000638076 NTAN1Q96AB6 310 aa22.18■■□□□ 1.14
CLN6-224ENST00000638076 FERMT1Q9BQL6 677 aa22.18■■□□□ 1.14
CLN6-224ENST00000638076 KLC4Q9NSK0 619 aa22.18■■□□□ 1.14
CLN6-224ENST00000638076 I6L893 689 aaPredicted RBP22.17■■□□□ 1.14
CLN6-224ENST00000638076 PPP1R12AO14974 1030 aaPredicted RBP22.17■■□□□ 1.14
CLN6-224ENST00000638076 UGT1A9O60656 530 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 OPHN1O60890 802 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 ZNF623O75123 536 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 KRT37O76014 449 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 AMHP03971 560 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 RPLP2P05387 115 aaKnown RBP22.17■■□□□ 1.14
CLN6-224ENST00000638076 ALADP13716 330 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 NEK3P51956 506 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 NKX3-2P78367 333 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 BNIP1Q12981 228 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 PDCD7Q8N8D1 485 aaKnown RBP22.17■■□□□ 1.14
CLN6-224ENST00000638076 VPS11Q9H270 941 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 UGT1A7Q9HAW7 530 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 UGT1A10Q9HAW8 530 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 UGT1A8Q9HAW9 530 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 DDIT4Q9NX09 232 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 FBXW11Q9UKB1 542 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 PCDHA11Q9Y5I1 949 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.17■■□□□ 1.14
CLN6-224ENST00000638076 SNRPAP09012 282 aaKnown RBP22.17■■□□□ 1.14
CLN6-224ENST00000638076 BRCC3P46736 316 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 RAB27AP51159 221 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 PRKCZQ05513 592 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 OTOAQ7RTW8 1153 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 HASPINQ8TF76 798 aa22.17■■□□□ 1.14
CLN6-224ENST00000638076 ZNF638Q14966 1978 aaKnown RBP22.16■■□□□ 1.14
CLN6-224ENST00000638076 A0A0U1RQF3 1178 aa22.16■■□□□ 1.14
CLN6-224ENST00000638076 CSH1P0DML2 217 aa22.16■■□□□ 1.14
CLN6-224ENST00000638076 CSH2P0DML3 217 aa22.16■■□□□ 1.14
CLN6-224ENST00000638076 ERCC2P18074 760 aa22.16■■□□□ 1.14
CLN6-224ENST00000638076 CDK16Q00536 496 aa22.16■■□□□ 1.14
CLN6-224ENST00000638076 SCAPQ12770 1279 aa22.16■■□□□ 1.14
CLN6-224ENST00000638076 BHLHA9Q7RTU4 235 aa22.16■■□□□ 1.14
CLN6-224ENST00000638076 EDEM1Q92611 657 aa22.16■■□□□ 1.14
CLN6-224ENST00000638076 FAM111AQ96PZ2 611 aa22.16■■□□□ 1.14
CLN6-224ENST00000638076 ECT2Q9H8V3 914 aa22.16■■□□□ 1.14
CLN6-224ENST00000638076 CSNK1G1Q9HCP0 422 aa22.16■■□□□ 1.14
CLN6-224ENST00000638076 ALG13Q9NP73 1137 aaKnown RBP22.16■■□□□ 1.14
CLN6-224ENST00000638076 ETV4P43268 484 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 TM4SF4P48230 202 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 TPI1P60174 286 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 NCALDP61601 193 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 WASHC5Q12768 1159 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 SEMA3BQ13214 749 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 LGSNQ5TDP6 509 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 CYB5D1Q6P9G0 228 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 METTL23Q86XA0 190 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 ZNF567Q8N184 647 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 PGAP3Q96FM1 320 aaPredicted RBP22.15■■□□□ 1.14
CLN6-224ENST00000638076 ADAM2Q99965 735 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 INPP5FQ9Y2H2 1132 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 WDR27A2RRH5 827 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 FAM159BA6NKW6 160 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 BDNFP23560 247 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 PSMB4P28070 264 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 CCND3P30281 292 aaPredicted RBP22.15■■□□□ 1.14
CLN6-224ENST00000638076 DSC3Q14574 896 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 LPIN1Q14693 890 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 ANKLE1Q8NAG6 615 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 STAMBPL1Q96FJ0 436 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 ACBD6Q9BR61 282 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 MANSC1Q9H8J5 431 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 PIH1D1Q9NWS0 290 aaKnown RBP22.15■■□□□ 1.14
CLN6-224ENST00000638076 TLL2Q9Y6L7 1015 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 USH1CQ9Y6N9 552 aa22.15■■□□□ 1.14
CLN6-224ENST00000638076 DHRS4L1P0CG22 281 aa22.14■■□□□ 1.14
CLN6-224ENST00000638076 MLNP12872 115 aa22.14■■□□□ 1.14
CLN6-224ENST00000638076 CRADDP78560 199 aa22.14■■□□□ 1.14
CLN6-224ENST00000638076 BMPR2Q13873 1038 aa22.14■■□□□ 1.14
CLN6-224ENST00000638076 ARL13BQ3SXY8 428 aa22.14■■□□□ 1.14
CLN6-224ENST00000638076 CASC4Q6P4E1 433 aa22.14■■□□□ 1.14
CLN6-224ENST00000638076 LRRC8BQ6P9F7 803 aa22.14■■□□□ 1.14
CLN6-224ENST00000638076 COLEC11Q9BWP8 271 aa22.14■■□□□ 1.14
CLN6-224ENST00000638076 EIF2B3Q9NR50 452 aaKnown RBP22.14■■□□□ 1.14
CLN6-224ENST00000638076 COPEO14579 308 aa22.14■■□□□ 1.13
CLN6-224ENST00000638076 CCDC15Q0P6D6 951 aa22.14■■□□□ 1.13
CLN6-224ENST00000638076 PARP6Q2NL67 630 aa22.14■■□□□ 1.13
CLN6-224ENST00000638076 INTS6LQ5JSJ4 861 aaKnown RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms