RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 CCSER2Q9H7U1 834 aa10.32□□□□□ -0.76
CACNA1A-216ENST00000635742 DNAJC17Q9NVM6 304 aaKnown RBP10.32□□□□□ -0.76
CACNA1A-216ENST00000635742 OR12D3Q9UGF7 316 aa10.32□□□□□ -0.76
CACNA1A-216ENST00000635742 NR2E3Q9Y5X4 410 aa10.32□□□□□ -0.76
CACNA1A-216ENST00000635742 SLC4A7Q9Y6M7 1214 aa10.32□□□□□ -0.76
CACNA1A-216ENST00000635742 OBSL1O75147 1896 aa10.32□□□□□ -0.76
CACNA1A-216ENST00000635742 GOLGA6BA6NDN3 693 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 KCNU1A8MYU2 1149 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 CTSAP10619 480 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 ATP2A2P16615 1042 aaKnown RBP10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 CA8P35219 290 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 HCAR3P49019 387 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 NR2C2P49116 596 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 PSEN1P49768 467 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 TBX4P57082 545 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 PLD1Q13393 1074 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 SLC45A4Q5BKX6 768 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 C10orf120Q5SQS8 335 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 CFAP58Q5T655 872 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 RNASEH2BQ5TBB1 312 aaKnown RBP10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 MANEALQ5VSG8 457 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 ANKRD22Q5VYY1 191 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 SPRED2Q7Z698 418 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 CCDC25Q86WR0 208 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 CDKL3Q8IVW4 592 aaPredicted RBP10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 KRT222Q8N1A0 295 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 BBOF1Q8ND07 529 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 RTP4Q96DX8 246 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 CEP295NLQ96MC4 621 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 SIK2Q9H0K1 926 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 OSBPL2Q9H1P3 480 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 RXFP1Q9HBX9 757 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 OGFRQ9NZT2 677 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 FNIP2Q9P278 1114 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 HSFX1Q9UBD0 423 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 TPX2Q9ULW0 747 aaKnown RBP10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 TLR6Q9Y2C9 796 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 CFAP69A5D8W1 941 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 TLL1O43897 1013 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 TLR5O60602 858 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 CSPG5O95196 566 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 CNPP09543 421 aaKnown RBP10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 EPHB2P29323 1055 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 HOXC13P31276 330 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 STIP1P31948 543 aaKnown RBP10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 CTNNB1P35222 781 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 PMS2P54278 862 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 CAV1Q03135 178 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 GAD2Q05329 585 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 TWF1Q12792 350 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 XRCC4Q13426 336 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 TRIP4Q15650 581 aaPredicted RBP10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 PIK3R6Q5UE93 754 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 MIB1Q86YT6 1006 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 IQCKQ8N0W5 287 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 CPT1BQ92523 772 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 PRCCQ92733 491 aaPredicted RBP10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 HAPLN3Q96S86 360 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 LGMNQ99538 433 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 RAD9AQ99638 391 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 UBE2OQ9C0C9 1292 aaKnown RBP10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 ACBD3Q9H3P7 528 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 OLA1Q9NTK5 396 aaKnown RBP10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 MARCH2Q9P0N8 246 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 PLAAQ9Y263 795 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 FARP1Q9Y4F1 1045 aaPredicted RBP10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 INSL5Q9Y5Q6 135 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 HS3ST4Q9Y661 456 aa10.31□□□□□ -0.76
CACNA1A-216ENST00000635742 GBF1Q92538 1859 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 ANAPC1Q9H1A4 1944 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 TCRBV7S3A2A0A539 114 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 SLC12A8A0AV02 714 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 PRRG1O14668 218 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 TMEM63AO94886 807 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 ARHGEF15O94989 841 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 SYF2O95926 243 aaKnown RBP10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 IGLV3-27P01718 113 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 HMBSP08397 361 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 SPATA31D3P0C874 917 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 CSH1P0DML2 217 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 CSH2P0DML3 217 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 SRGAP2BP0DMP2 458 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 OAS2P29728 719 aaKnown RBP10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 ZNF135P52742 658 aaPredicted RBP10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 PRKD1Q15139 912 aaPredicted RBP10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 SPATA31D4Q6ZUB0 917 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 C14orf80Q86SX3 495 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 GPR65Q8IYL9 337 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 TCEAL8Q8IYN2 117 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 OR2W6PQ8NHA6 318 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 CCDC110Q8TBZ0 833 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 ZNF512Q96ME7 567 aaPredicted RBP10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 CDC42EP4Q9H3Q1 356 aaKnown RBP10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 SEMA4AQ9H3S1 761 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 PRDM12Q9H4Q4 367 aa10.3□□□□□ -0.76
CACNA1A-216ENST00000635742 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.29□□□□□ -0.76
CACNA1A-216ENST00000635742 LINC01553A4QN01 128 aa10.29□□□□□ -0.76
CACNA1A-216ENST00000635742 ZNF840PA6NDX5 716 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms