RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 CNDP2Q96KP4 475 aaKnown RBP15.34■□□□□ 0.05
PNKP-218ENST00000625299 HEXIM2Q96MH2 286 aaKnown RBP15.34■□□□□ 0.05
PNKP-218ENST00000625299 FCRL3Q96P31 734 aaPredicted RBP15.34■□□□□ 0.05
PNKP-218ENST00000625299 DNAI2Q9GZS0 605 aa15.34■□□□□ 0.05
PNKP-218ENST00000625299 NIF3L1Q9GZT8 377 aa15.34■□□□□ 0.05
PNKP-218ENST00000625299 CYP3A43Q9HB55 503 aa15.34■□□□□ 0.05
PNKP-218ENST00000625299 SGK2Q9HBY8 427 aa15.34■□□□□ 0.05
PNKP-218ENST00000625299 PRSS16Q9NQE7 514 aa15.34■□□□□ 0.05
PNKP-218ENST00000625299 DMAC2Q9NW81 257 aa15.34■□□□□ 0.05
PNKP-218ENST00000625299 GGA2Q9UJY4 613 aa15.34■□□□□ 0.05
PNKP-218ENST00000625299 KALRNO60229 2985 aa15.34■□□□□ 0.05
PNKP-218ENST00000625299 A0A1B0GTQ1 180 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 ATXN7O15265 892 aaPredicted RBP15.33■□□□□ 0.04
PNKP-218ENST00000625299 RRP8O43159 456 aaKnown RBP15.33■□□□□ 0.04
PNKP-218ENST00000625299 TLX3O43711 291 aaPredicted RBP15.33■□□□□ 0.04
PNKP-218ENST00000625299 RFPL3O75679 317 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 LDOC1O95751 146 aaPredicted RBP15.33■□□□□ 0.04
PNKP-218ENST00000625299 ITGAVP06756 1048 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 TRIM49P0CI25 452 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 TRIM49CP0CI26 452 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 GCLMP48507 274 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 HARS2P49590 506 aaKnown RBP15.33■□□□□ 0.04
PNKP-218ENST00000625299 STK4Q13043 487 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 ZNF776Q68DI1 518 aaPredicted RBP15.33■□□□□ 0.04
PNKP-218ENST00000625299 KIAA0895LQ68EN5 471 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 ADIPOR2Q86V24 386 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 PIGZQ86VD9 579 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 SLC9A9Q8IVB4 645 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 FMNL3Q8IVF7 1028 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 AHI1Q8N157 1196 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 KIAA0895Q8NCT3 520 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 TMC2Q8TDI7 906 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 TAS1R2Q8TE23 839 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 NDRG1Q92597 394 aaKnown RBP15.33■□□□□ 0.04
PNKP-218ENST00000625299 ZNF396Q96N95 335 aaPredicted RBP15.33■□□□□ 0.04
PNKP-218ENST00000625299 BACH2Q9BYV9 841 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 MTG2Q9H4K7 406 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 PRORYQ9H606 182 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 FBRSQ9HAH7 460 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 EXOC1Q9NV70 894 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 NCKAP1Q9Y2A7 1128 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 FRMD4BQ9Y2L6 1034 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 RAI2Q9Y5P3 530 aa15.33■□□□□ 0.04
PNKP-218ENST00000625299 COL5A1P20908 1838 aaPredicted RBP15.32■□□□□ 0.04
PNKP-218ENST00000625299 IKBKBO14920 756 aa15.32■□□□□ 0.04
PNKP-218ENST00000625299 DFNA5O60443 496 aa15.32■□□□□ 0.04
PNKP-218ENST00000625299 IGHV4-34P06331 123 aa15.32■□□□□ 0.04
PNKP-218ENST00000625299 PABPC1P11940 636 aaKnown RBP15.32■□□□□ 0.04
PNKP-218ENST00000625299 EIF2S3P41091 472 aaKnown RBP15.32■□□□□ 0.04
PNKP-218ENST00000625299 VAMP7P51809 220 aa15.32■□□□□ 0.04
PNKP-218ENST00000625299 RACK1P63244 317 aaKnown RBP15.32■□□□□ 0.04
PNKP-218ENST00000625299 ZBTB16Q05516 673 aa15.32■□□□□ 0.04
PNKP-218ENST00000625299 TARDBPQ13148 414 aaKnown RBP eCLIP15.32■□□□□ 0.04
PNKP-218ENST00000625299 FOXD4L6Q3SYB3 417 aaPredicted RBP15.32■□□□□ 0.04
PNKP-218ENST00000625299 C1orf220Q5T0J3 134 aa15.32■□□□□ 0.04
PNKP-218ENST00000625299 HES3Q5TGS1 186 aa15.32■□□□□ 0.04
PNKP-218ENST00000625299 MBLAC2Q68D91 279 aa15.32■□□□□ 0.04
PNKP-218ENST00000625299 FOXD4L3Q6VB84 417 aaPredicted RBP15.32■□□□□ 0.04
PNKP-218ENST00000625299 FAM217AQ8IXS0 508 aa15.32■□□□□ 0.04
PNKP-218ENST00000625299 EID2Q8N6I1 236 aa15.32■□□□□ 0.04
PNKP-218ENST00000625299 CCDC150Q8NCX0 1101 aa15.32■□□□□ 0.04
PNKP-218ENST00000625299 TMA16Q96EY4 203 aaKnown RBP15.32■□□□□ 0.04
PNKP-218ENST00000625299 ELF4Q99607 663 aaPredicted RBP15.32■□□□□ 0.04
PNKP-218ENST00000625299 ORAI3Q9BRQ5 295 aa15.32■□□□□ 0.04
PNKP-218ENST00000625299 AASDHPPTQ9NRN7 309 aa15.32■□□□□ 0.04
PNKP-218ENST00000625299 SFMBT1Q9UHJ3 866 aa15.32■□□□□ 0.04
PNKP-218ENST00000625299 PCDHGA1Q9Y5H4 931 aa15.32■□□□□ 0.04
PNKP-218ENST00000625299 MYLKQ15746 1914 aa15.32■□□□□ 0.04
PNKP-218ENST00000625299 PTPRQQ9UMZ3 2332 aa15.32■□□□□ 0.04
PNKP-218ENST00000625299 TK2O00142 265 aa15.31■□□□□ 0.04
PNKP-218ENST00000625299 VILLO15195 856 aa15.31■□□□□ 0.04
PNKP-218ENST00000625299 ATP5BP06576 529 aaKnown RBP15.31■□□□□ 0.04
PNKP-218ENST00000625299 DLDP09622 509 aaKnown RBP15.31■□□□□ 0.04
PNKP-218ENST00000625299 PLA2G2AP14555 144 aa15.31■□□□□ 0.04
PNKP-218ENST00000625299 POLR2EP19388 210 aaKnown RBP15.31■□□□□ 0.04
PNKP-218ENST00000625299 TKTL1P51854 596 aa15.31■□□□□ 0.04
PNKP-218ENST00000625299 TRIP4Q15650 581 aaPredicted RBP15.31■□□□□ 0.04
PNKP-218ENST00000625299 FOXD4L5Q5VV16 416 aaPredicted RBP15.31■□□□□ 0.04
PNKP-218ENST00000625299 ZNF605Q86T29 641 aa15.31■□□□□ 0.04
PNKP-218ENST00000625299 ZC3H3Q8IXZ2 948 aaKnown RBP15.31■□□□□ 0.04
PNKP-218ENST00000625299 CEP57L1Q8IYX8 460 aa15.31■□□□□ 0.04
PNKP-218ENST00000625299 RNF139Q8WU17 664 aa15.31■□□□□ 0.04
PNKP-218ENST00000625299 FOXD4L4Q8WXT5 416 aaPredicted RBP15.31■□□□□ 0.04
PNKP-218ENST00000625299 BAP1Q92560 729 aa15.31■□□□□ 0.04
PNKP-218ENST00000625299 EDEM1Q92611 657 aa15.31■□□□□ 0.04
PNKP-218ENST00000625299 GOLGA1Q92805 767 aa15.31■□□□□ 0.04
PNKP-218ENST00000625299 SKA1Q96BD8 255 aa15.31■□□□□ 0.04
PNKP-218ENST00000625299 ULBP1Q9BZM6 244 aa15.31■□□□□ 0.04
PNKP-218ENST00000625299 PABPC3Q9H361 631 aaKnown RBP15.31■□□□□ 0.04
PNKP-218ENST00000625299 KCTD10Q9H3F6 313 aa15.31■□□□□ 0.04
PNKP-218ENST00000625299 FBXL12Q9NXK8 326 aa15.31■□□□□ 0.04
PNKP-218ENST00000625299 FAM13BQ9NYF5 915 aa15.31■□□□□ 0.04
PNKP-218ENST00000625299 SUN2Q9UH99 717 aa15.31■□□□□ 0.04
PNKP-218ENST00000625299 A0A1W2PP55 124 aa15.3■□□□□ 0.04
PNKP-218ENST00000625299 A0A1W2PPC4 97 aa15.3■□□□□ 0.04
PNKP-218ENST00000625299 PDXKO00764 312 aa15.3■□□□□ 0.04
PNKP-218ENST00000625299 PAPSS1O43252 624 aaPredicted RBP15.3■□□□□ 0.04
PNKP-218ENST00000625299 KLRC4O43908 158 aa15.3■□□□□ 0.04
PNKP-218ENST00000625299 YEATS4O95619 227 aa15.3■□□□□ 0.04
PNKP-218ENST00000625299 ZBED1O96006 694 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms