RNA–Protein interactions for RNA: ENST00000623391.1

AP000542.3-201, humanhuman

BASIC

Gene AP000542.3, Length 6,114 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000542.3-201ENST00000623391 SPATA13Q96N96 652 aa9.1□□□□□ -0.95
AP000542.3-201ENST00000623391 RBM22Q9NW64 420 aaKnown RBP eCLIP9.1□□□□□ -0.95
AP000542.3-201ENST00000623391 ADGRA3Q8IWK6 1321 aa9.1□□□□□ -0.95
AP000542.3-201ENST00000623391 DYTNA2CJ06 578 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 E7ENQ6 273 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 MAP3K13O43283 966 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 CYP1A1P04798 512 aaPredicted RBP9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 AVPR1AP37288 418 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 TUBP50607 506 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 IKBKEQ14164 716 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 SYCP2LQ5T4T6 812 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 LCA5Q86VQ0 697 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 NKX2-3Q8TAU0 364 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 RNF217Q8TC41 542 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 IRGQQ8WZA9 623 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 CASP10Q92851 521 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 SLC40A1Q9NP59 571 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 NT5MQ9NPB1 228 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 SAR1AQ9NR31 198 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 ETNK2Q9NVF9 386 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 AURKCQ9UQB9 309 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 AHDC1Q5TGY3 1603 aaPredicted RBP9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 TMEM114B3SHH9 223 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 AKAP10O43572 662 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 RPN2P04844 631 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 ZNF7P17097 686 aaPredicted RBP9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 POLD2P49005 469 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 PTP4A2Q12974 167 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 DUSP28Q4G0W2 176 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 BRMS1LQ5PSV4 323 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 MFSD7Q6UXD7 560 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 PSTKQ8IV42 348 aaKnown RBP9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 ARID3BQ8IVW6 561 aaPredicted RBP9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 EMC1Q8N766 993 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 TDRD5Q8NAT2 981 aaKnown RBP9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 SLC39A8Q9C0K1 460 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 NDUFA13Q9P0J0 144 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 RNF103O00237 685 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 PTPN4P29074 926 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 CASP5P51878 434 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 POLE2P56282 527 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 MRPS35P82673 323 aaKnown RBP9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 FMO1Q01740 532 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 PCID2Q5JVF3 399 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 BNC2Q6ZN30 1099 aaPredicted RBP9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 TRIM69Q86WT6 500 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 HORMAD1Q86X24 394 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 ZNF398Q8TD17 642 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 DDI1Q8WTU0 396 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 PANX3Q96QZ0 392 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 THTPAQ9BU02 230 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 OSBPL1AQ9BXW6 950 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 CHORDC1Q9UHD1 332 aaPredicted RBP9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 MAFBQ9Y5Q3 323 aaPredicted RBP9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 COL1A1P02452 1464 aaPredicted RBP9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 RAD51BO15315 384 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 POLR2LP62875 67 aaKnown RBP9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 NOMO3P69849 1222 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 RASGEF1CQ8N431 466 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 DNAJC9Q8WXX5 260 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 GPR20Q99678 358 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 GPAMQ9HCL2 828 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 E5RJQ4 531 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 IRF6O14896 467 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 ITGB5P18084 799 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 AKAP5P24588 427 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 PPP3CCP48454 512 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 HPCAP84074 193 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 ZNF844Q08AG5 666 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 APOL5Q9BWW9 433 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 TMEM120AQ9BXJ8 343 aa9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 POLR1EQ9GZS1 481 aaKnown RBP9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 UBA2Q9UBT2 640 aaPredicted RBP9.09□□□□□ -0.95
AP000542.3-201ENST00000623391 NUP188Q5SRE5 1749 aa9.09□□□□□ -0.96
AP000542.3-201ENST00000623391 AIM2O14862 343 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 PFDN1O60925 122 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 DDHD2O94830 711 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 PTPN3P26045 913 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 ARL4DP49703 201 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 CSE1LP55060 971 aaKnown RBP9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 KLC1Q07866 573 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 FLOT2Q14254 428 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 FAM171A1Q5VUB5 890 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 AGR3Q8TD06 166 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 DTX3LQ8TDB6 740 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 SLC7A5P2Q9GIP4 190 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 SCN3BQ9NY72 215 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 PDP2Q9P2J9 529 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 HEY2Q9UBP5 337 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 WARS2Q9UGM6 360 aaKnown RBP9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 ZSCAN5CA6NGD5 496 aaPredicted RBP9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 QSOX1O00391 747 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 CKMP06732 381 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 ASGR1P07306 291 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 YBX3P16989 372 aaKnown RBP eCLIP9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 PTPN7P35236 360 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 ARL2P36404 184 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 ELK3P41970 407 aa9.08□□□□□ -0.96
AP000542.3-201ENST00000623391 PRMT2P55345 433 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms